BS21571.complete Sequence
440 bp assembled on 2011-01-18
GenBank Submission: KX805060
> BS21571.complete
GAAGTTATCAGTCGACATGGGTCTGATGCGGACAGTTGGCGGCGCCAGCG
ATGCACAGCTGCCGGAGGAGGCGGTGTCTACGCTCAATCATTGCCCGACC
TACCGACAGATTCCAGGTGCCGGAACGGGCGCAGGATCAGCGCCAGCCAA
GCGAGTACCCGTCCTGTTTTCCACCAACCGTGGACTCTATCTGCGCCTGG
CCCAACCACTGGCAGATCAGATGGAGGTGATGACACTGCAGCCAAGCGGA
CAGAACTACAACATCAGCTTCTGCGATCTGGAGCGCTGGAGCACCAATCG
GGCGAATGTGGTCAGCCTGGAGGACACCTTTAGCATCATGCAGCAGCGCA
ATATGTCGCCGGAGTCTATGAACTACCAGCCACGCCTGTGGAAGAACAAC
GTCAGCTACAGCCTGATGCACTGAAAGCTTTCTAGACCAT
BS21571.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:20:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14313-RA | 408 | CG14313-PA | 1..408 | 17..424 | 2040 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:20:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14313-RA | 652 | CG14313-RA | 164..573 | 16..425 | 2050 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:20:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18191531..18191804 | 289..16 | 1370 | 100 | Minus |
3R | 32079331 | 3R | 18191323..18191459 | 425..289 | 685 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:20:02 has no hits.
BS21571.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:09 Download gff for
BS21571.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14313-RA | 165..571 | 17..423 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:54 Download gff for
BS21571.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14313-RA | 165..571 | 17..423 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:40 Download gff for
BS21571.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14313-RA | 165..571 | 17..423 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:40 Download gff for
BS21571.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18191531..18191803 | 17..289 | 100 | | Minus |
3R | 18191325..18191458 | 290..423 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:54 Download gff for
BS21571.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14017047..14017180 | 290..423 | 100 | <- | Minus |
arm_3R | 14017253..14017525 | 17..289 | 100 | | Minus |
BS21571.pep Sequence
Translation from 16 to 423
> BS21571.pep
MGLMRTVGGASDAQLPEEAVSTLNHCPTYRQIPGAGTGAGSAPAKRVPVL
FSTNRGLYLRLAQPLADQMEVMTLQPSGQNYNISFCDLERWSTNRANVVS
LEDTFSIMQQRNMSPESMNYQPRLWKNNVSYSLMH*
BS21571.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:06:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14313-PA | 135 | CG14313-PA | 1..135 | 1..135 | 708 | 100 | Plus |