Clone BS21571 Report

Search the DGRC for BS21571

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:215
Well:71
Vector:pDNR-Dual
Associated Gene/TranscriptCG14313-RA
Protein status:BS21571.pep: full length peptide match
Sequenced Size:440

Clone Sequence Records

BS21571.complete Sequence

440 bp assembled on 2011-01-18

GenBank Submission: KX805060

> BS21571.complete
GAAGTTATCAGTCGACATGGGTCTGATGCGGACAGTTGGCGGCGCCAGCG
ATGCACAGCTGCCGGAGGAGGCGGTGTCTACGCTCAATCATTGCCCGACC
TACCGACAGATTCCAGGTGCCGGAACGGGCGCAGGATCAGCGCCAGCCAA
GCGAGTACCCGTCCTGTTTTCCACCAACCGTGGACTCTATCTGCGCCTGG
CCCAACCACTGGCAGATCAGATGGAGGTGATGACACTGCAGCCAAGCGGA
CAGAACTACAACATCAGCTTCTGCGATCTGGAGCGCTGGAGCACCAATCG
GGCGAATGTGGTCAGCCTGGAGGACACCTTTAGCATCATGCAGCAGCGCA
ATATGTCGCCGGAGTCTATGAACTACCAGCCACGCCTGTGGAAGAACAAC
GTCAGCTACAGCCTGATGCACTGAAAGCTTTCTAGACCAT

BS21571.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:20:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG14313-RA 408 CG14313-PA 1..408 17..424 2040 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:20:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG14313-RA 652 CG14313-RA 164..573 16..425 2050 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:20:01
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18191531..18191804 289..16 1370 100 Minus
3R 32079331 3R 18191323..18191459 425..289 685 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:20:02 has no hits.

BS21571.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:09 Download gff for BS21571.complete
Subject Subject Range Query Range Percent Splice Strand
CG14313-RA 165..571 17..423 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:54 Download gff for BS21571.complete
Subject Subject Range Query Range Percent Splice Strand
CG14313-RA 165..571 17..423 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:40 Download gff for BS21571.complete
Subject Subject Range Query Range Percent Splice Strand
CG14313-RA 165..571 17..423 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:40 Download gff for BS21571.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18191531..18191803 17..289 100   Minus
3R 18191325..18191458 290..423 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:54 Download gff for BS21571.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14017047..14017180 290..423 100 <- Minus
arm_3R 14017253..14017525 17..289 100   Minus

BS21571.pep Sequence

Translation from 16 to 423

> BS21571.pep
MGLMRTVGGASDAQLPEEAVSTLNHCPTYRQIPGAGTGAGSAPAKRVPVL
FSTNRGLYLRLAQPLADQMEVMTLQPSGQNYNISFCDLERWSTNRANVVS
LEDTFSIMQQRNMSPESMNYQPRLWKNNVSYSLMH*

BS21571.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:06:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG14313-PA 135 CG14313-PA 1..135 1..135 708 100 Plus