BS21572.complete Sequence
719 bp assembled on 2011-01-18
GenBank Submission: KX804609
> BS21572.complete
GAAGTTATCAGTCGACATGATAGTGTTTCCGATTGTTTGTTCCAGAAGCA
ACACACATATGGACTGGCCCTGTAGTGGATTGTGTACCCAACACAGCCAA
ACAAACAGTGAGGCAATCACCCTTCGAAATGGGCCAAAAGCACACCAACA
CCAGTGCAGCAGTGCATGCACTCGATGGCTGTGTGTGCGTGTGAAAGTAG
TGAAAGCTGAAAGCCGAGGGCGAACGGGGCCAATACTTATGCTTATGCAA
GGCAGCCGAGATGCCGAGATGCCGACGCCACCGCCCCAAAGGGAGGCCAA
AAACGGAAAACAGGCGACATTCATCGCAGGACGTGAAGTGTTCACTGTAC
TTTGGGAGCGGAGGATAAGTCAAGACGTCAACAGAGGAAGCTGTACGATG
TTCGCCCCCCACTCGCTGCCCGTGACGTCACGACTGTTGCTTCTGGTGGT
GACACTGCTCTTCTGCCCCGTGCAGGCGCATCTCTCGAAGCGAAGCTACT
CGGATCAGAGTGTCCACGGCTACATGACCGAGCGCACCTGCTGGTGGAAC
GAGGTGTGTAAGGAGGAGTTCCAGAGCCTCTTCCGCTGCAAGTGCCCCCA
GTTCTCCTACTGCCGCTCGCCGGGACGCTACTACAATGCCTACTGCTCGA
TGACGGATACCGGTTATATTTGGACCCAGCCGAACTGGGATTGGGGGGCG
TAGAAGCTTTCTAGACCAT
BS21572.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:20:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
St3-RC | 1581 | CG44167-PC | 939..1581 | 61..703 | 3215 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:20:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
St3-RC | 2062 | CG44167-RC | 959..1601 | 61..703 | 3215 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:20:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23686538..23686877 | 61..400 | 1700 | 100 | Plus |
2R | 25286936 | 2R | 23687032..23687164 | 400..532 | 665 | 100 | Plus |
2R | 25286936 | 2R | 23687431..23687519 | 615..703 | 445 | 100 | Plus |
2R | 25286936 | 2R | 23687232..23687316 | 531..615 | 425 | 100 | Plus |
2R | 25286936 | 2R | 23685850..23685894 | 17..61 | 225 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:20:07 has no hits.
BS21572.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:10 Download gff for
BS21572.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11293-RB | 172..858 | 17..703 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:57 Download gff for
BS21572.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
St3-RD | 172..858 | 17..703 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:42 Download gff for
BS21572.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
St3-RC | 959..1601 | 61..703 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:42 Download gff for
BS21572.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23685850..23685893 | 17..60 | 100 | -> | Plus |
2R | 23686538..23686877 | 61..400 | 100 | -> | Plus |
2R | 23687033..23687164 | 401..532 | 100 | -> | Plus |
2R | 23687234..23687316 | 533..615 | 100 | -> | Plus |
2R | 23687432..23687519 | 616..703 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:57 Download gff for
BS21572.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19573373..19573416 | 17..60 | 100 | -> | Plus |
arm_2R | 19574061..19574400 | 61..400 | 100 | -> | Plus |
arm_2R | 19574556..19574687 | 401..532 | 100 | -> | Plus |
arm_2R | 19574757..19574839 | 533..615 | 100 | -> | Plus |
arm_2R | 19574955..19575042 | 616..703 | 100 | | Plus |
BS21572.pep Sequence
Translation from 16 to 702
> BS21572.pep
MIVFPIVCSRSNTHMDWPCSGLCTQHSQTNSEAITLRNGPKAHQHQCSSA
CTRWLCVRVKVVKAESRGRTGPILMLMQGSRDAEMPTPPPQREAKNGKQA
TFIAGREVFTVLWERRISQDVNRGSCTMFAPHSLPVTSRLLLLVVTLLFC
PVQAHLSKRSYSDQSVHGYMTERTCWWNEVCKEEFQSLFRCKCPQFSYCR
SPGRYYNAYCSMTDTGYIWTQPNWDWGA*
BS21572.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:06:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
St3-PC | 526 | CG44167-PC | 314..526 | 16..228 | 1191 | 100 | Plus |