Clone BS21574 Report

Search the DGRC for BS21574

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:215
Well:74
Vector:pDNR-Dual
Associated Gene/TranscriptCG14989-RC
Protein status:BS21574.pep: full length peptide match
Sequenced Size:773

Clone Sequence Records

BS21574.complete Sequence

773 bp assembled on 2011-01-18

GenBank Submission: KX803984

> BS21574.complete
GAAGTTATCAGTCGACATGGGAGAGCGTGTTGAAAAGCGACAGAGAAAAA
TGGGGGGATGTGGATTACAGCTCGTCATACCATTGGTCACAATCCTCATC
CTGGCTGCGCAGGCGCAGGCTGTGACGTCATCGCCCGTCCTGAAGGACGA
CACTTTGGGGGATGCTGCTCCGACGGCAGCGCATTCAGCAGCCAAAATCC
TTGAAGACGTCCAAACCATCAGCGCAGTTCAGGATTGGAGTTTGCTGTGT
AAAGAGCTCTGCGGAGCTGGCCTGGGCGTTGCTTCAACGCCTGATGTGGC
CAAAAACACAATCCTGAGACCGGAGACGGATGTGGCCAAGTGCCGGCAAC
TGTGTGGACTGCCTAGGGCTAAAGCGGGCGACTTGGTCTGCTCGAGCTTT
TGTGGTCAGATGGGTCGCTCCCTGCCCGGATGCAGTCCCTGCCAGCAGGA
GGTGCGCAGGATGAGGGTGATGAAGGAGCGGAAGCAGGAGGAGGAGAAGC
AGGAGGAGGTTCGAAAGGACGAGGAGAAGGCCAGTGGAGTGCTGGGCGAT
CCAACACACGGTTCCAGAGCCGCGGAGAATGCCGAACGGAGAGGATCGGT
CGAGGAAGCAACAGTGTCCGCAGCTACCGTGGCAGCCGCCTCGGAAACGG
ACACAACCACTCCGGCACCGGACTGGGACGAAGTGTGCAAGGTGCTCTGC
AAGACTGGCGATGGCGGGTCTTTGTGCAACTGTGATTTATCGCCGTTCTT
CAGCTGAAAGCTTTCTAGACCAT

BS21574.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:20:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG14989-RE 741 CG14989-PE 1..741 17..757 3705 100 Plus
CG14989-RD 741 CG14989-PD 1..741 17..757 3705 100 Plus
CG14989-RC 741 CG14989-PC 1..741 17..757 3705 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:20:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG14989-RE 2917 CG14989-RE 132..872 17..757 3705 100 Plus
CG14989-RD 1508 CG14989-RD 127..867 17..757 3705 100 Plus
CG14989-RC 1111 CG14989-RC 132..872 17..757 3705 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:20:53
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4090272..4090661 368..757 1950 100 Plus
3L 28110227 3L 4088967..4089214 17..264 1240 100 Plus
3L 28110227 3L 4090034..4090146 260..372 535 98.2 Plus
Blast to na_te.dros performed on 2014-11-26 16:20:54 has no hits.

BS21574.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:16 Download gff for BS21574.complete
Subject Subject Range Query Range Percent Splice Strand
CG14989-RB 1..707 50..756 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:54:18 Download gff for BS21574.complete
Subject Subject Range Query Range Percent Splice Strand
CG14989-RC 132..871 17..756 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:02 Download gff for BS21574.complete
Subject Subject Range Query Range Percent Splice Strand
CG14989-RC 132..871 17..756 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:02 Download gff for BS21574.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4088967..4089214 17..264 100 -> Plus
3L 4090039..4090142 265..368 100 -> Plus
3L 4090273..4090660 369..756 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:54:18 Download gff for BS21574.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4088967..4089214 17..264 100 -> Plus
arm_3L 4090039..4090142 265..368 100 -> Plus
arm_3L 4090273..4090660 369..756 100   Plus

BS21574.pep Sequence

Translation from 16 to 756

> BS21574.pep
MGERVEKRQRKMGGCGLQLVIPLVTILILAAQAQAVTSSPVLKDDTLGDA
APTAAHSAAKILEDVQTISAVQDWSLLCKELCGAGLGVASTPDVAKNTIL
RPETDVAKCRQLCGLPRAKAGDLVCSSFCGQMGRSLPGCSPCQQEVRRMR
VMKERKQEEEKQEEVRKDEEKASGVLGDPTHGSRAAENAERRGSVEEATV
SAATVAAASETDTTTPAPDWDEVCKVLCKTGDGGSLCNCDLSPFFS*

BS21574.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:06:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG14989-PE 246 CG14989-PE 1..246 1..246 1272 100 Plus
CG14989-PD 246 CG14989-PD 1..246 1..246 1272 100 Plus
CG14989-PC 246 CG14989-PC 1..246 1..246 1272 100 Plus
CG14989-PF 171 CG14989-PF 1..171 76..246 902 99.4 Plus