BS21582.complete Sequence
1037 bp assembled on 2011-01-18
GenBank Submission: KX800901
> BS21582.complete
GAAGTTATCAGTCGACATGCACAGCCGGCAATTTCAGAATGTGTTCTTGA
CAAAGATACTAAGTGATATCGACCGGCGGCACGAAAAGCACGGTTACGAT
CCACTGCTACCCCTTCATCAGCTTGAAAGGGCAAAGTATATGAAGCTTAC
TAGCTTGCGTTTGACTTTGTTTGAGTTCGTGTCCATTGTTGAGAACGCCT
GTTTCATGGCCACAACCTGCTTGCAGTTGTTTGCGATTTGCTTTCTGGAT
TACGGGCTGTTCTGGCTGTTGGCAACTATATCCCTCCATGGCCACCAAGA
GACTGGGCTGGAGGTGCCCGCTTACGTCGATCTAGAGATTAAGGGTGGGG
GCTTTGTGGCGGATGTCATGCGGGGAATCGCTAATGCCTTTCGACCCTTG
ACGCAAAAAAGCATTTTAGACGTGAATCCTTGCCTCCCGCTGCCCGTGAA
ACCTGATTATGCGGAGTATCTAATTATATTATTACTCTGTCTGCTCGCTT
GGCTGATCCTTTTGGCCGAGCCGTATATTTTGCGTACTCGCCATCTTATA
ATGGCCCACTTTTATCCAAAACGCGCCAAGGAAAGAGGCATGTTTCTGTA
CAACATGATTTCCGAAGATAGAACAAGCATTTTTAAGTTTATCCGCCGCA
GAAAGCGTAATGAGTTTAACCACACACGGAATGTGAAGCACACCAGAAAC
TACACTTGGCTGAACAATAGATTCTCCTGTTTAATGTGCATGTGCTCCTG
CTGCTCATCCTGTCAAAGCACTGAGAGGTGCACCATATGTGGCCGATCTC
TGACTCTTTCAAATCGTAACCCCTGCGACACTCCTGGATGCAAAGGGGTT
TATTGCGGTAAATGCTTTGAAAAGTCACACAATAAGTGTTGTCTGTGCAA
TCGACCAGTGGATTATGGTGATTTTTCCGACGTTACTGAAGTAGACGACT
CTTCGGACTATTCTGAAAAAGAGTCTTTTAGCGAAAGGCAGTACAGGAAG
ACCTGTGGAGGACAACGCTAGAAGCTTTCTAGACCAT
BS21582.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:20:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6845-RE | 1005 | CG6845-PE | 1..1005 | 17..1021 | 5025 | 100 | Plus |
| CG6845-RC | 2019 | CG6845-PC | 1015..2019 | 17..1021 | 5025 | 100 | Plus |
| CG6845-RD | 912 | CG6845-PD | 514..912 | 623..1021 | 1995 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:20:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6845-RE | 2294 | CG6845-RE | 1204..2208 | 17..1021 | 5025 | 100 | Plus |
| CG6845-RC | 2176 | CG6845-RC | 1086..2090 | 17..1021 | 5025 | 100 | Plus |
| CG6845-RD | 1069 | CG6845-RD | 585..983 | 623..1021 | 1995 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:20:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 147934..148413 | 144..623 | 2400 | 100 | Plus |
| 3L | 28110227 | 3L | 148462..148645 | 624..807 | 920 | 100 | Plus |
| 3L | 28110227 | 3L | 148704..148841 | 808..945 | 690 | 100 | Plus |
| 3L | 28110227 | 3L | 147755..147883 | 17..145 | 645 | 100 | Plus |
| 3L | 28110227 | 3L | 148895..148970 | 946..1021 | 380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:20:44 has no hits.
BS21582.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:15 Download gff for
BS21582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6845-RE | 1184..2188 | 17..1021 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:54:12 Download gff for
BS21582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6845-RC | 1086..2090 | 17..1021 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:59 Download gff for
BS21582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6845-RC | 1086..2090 | 17..1021 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:59 Download gff for
BS21582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 147936..148413 | 146..623 | 100 | -> | Plus |
| 3L | 147755..147883 | 17..145 | 100 | -> | Plus |
| 3L | 148462..148645 | 624..807 | 100 | -> | Plus |
| 3L | 148704..148841 | 808..945 | 100 | -> | Plus |
| 3L | 148895..148970 | 946..1021 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:54:12 Download gff for
BS21582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 147755..147883 | 17..145 | 100 | -> | Plus |
| arm_3L | 147936..148413 | 146..623 | 100 | -> | Plus |
| arm_3L | 148462..148645 | 624..807 | 100 | -> | Plus |
| arm_3L | 148704..148841 | 808..945 | 100 | -> | Plus |
| arm_3L | 148895..148970 | 946..1021 | 100 | | Plus |
BS21582.pep Sequence
Translation from 16 to 1020
> BS21582.pep
MHSRQFQNVFLTKILSDIDRRHEKHGYDPLLPLHQLERAKYMKLTSLRLT
LFEFVSIVENACFMATTCLQLFAICFLDYGLFWLLATISLHGHQETGLEV
PAYVDLEIKGGGFVADVMRGIANAFRPLTQKSILDVNPCLPLPVKPDYAE
YLIILLLCLLAWLILLAEPYILRTRHLIMAHFYPKRAKERGMFLYNMISE
DRTSIFKFIRRRKRNEFNHTRNVKHTRNYTWLNNRFSCLMCMCSCCSSCQ
STERCTICGRSLTLSNRNPCDTPGCKGVYCGKCFEKSHNKCCLCNRPVDY
GDFSDVTEVDDSSDYSEKESFSERQYRKTCGGQR*
BS21582.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:06:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6845-PE | 334 | CG6845-PE | 1..334 | 1..334 | 1818 | 100 | Plus |
| CG6845-PC | 672 | CG6845-PC | 339..672 | 1..334 | 1818 | 100 | Plus |
| CG6845-PD | 303 | CG6845-PD | 172..303 | 203..334 | 758 | 100 | Plus |
| CG32320-PD | 767 | CG32320-PD | 430..751 | 6..319 | 529 | 35.5 | Plus |
| snky-PB | 715 | CG11281-PB | 405..691 | 5..294 | 198 | 26.3 | Plus |
