BS21585.complete Sequence
2810 bp assembled on 2011-02-17
GenBank Submission: KX803636
> BS21585.complete
GAAGTTATCAGTCGACATGTACGGCATTGATAATTACCCCAAGAATTATC
ATGCCAGTGGCATTGGCCTTGTCAATTTGGCGGCCTTGGGCTACAGCAAG
AATGAAGTCAGCGGCGGGAACGAAGGAGGAGGAGCTCCCAAACCCAAAGC
GGGTCTCTACCCCTCGTTGCCCTATCCATCATCCGAATCCGTGGGCGGAA
TGCCATATGTGGTAAAGCAGACGAGTCATGCCCAGAATGCTTCGTATGCG
GGACCCACCATGGGCATGGGAATGCCCGTGCCAGAAGCCCCCTCAGCGCC
GGCTCCATACCCCAGTGCCACGCCATACCCTGGATCAGGACTTTATCCTA
GTCTGCCATCAGCCAACGTATCATCGCTGCCGTACCCCACTGCGCCTATG
GCGCCCTATCCAACCGGAATGCCCTATCCAACTGGCATGCCGCAGCCCAA
TCTACCCTATCCGGCGGCTCCGCTCGCACCATATCCATCTGCCATGCCCG
GTTTGCCCGGTATGCCAATGCCGTACGCTCCCATGCCAACGAGTCCGGCT
CCCCAGCACAATATCGGATTCCCAGCACTACCATATCCCACGGCACCGCC
ACCGGAAAGTGCTCCAACCCAGGAGGAGGAACCTTCCGTCGGCGTGGCCG
AGCTAAGCTTCACCAGCGTGAAGGTGCCCGAGAACCAGAACATGTTTTGG
ATGGGTCGCAAGGCCACTAGTGCCCGGCAGAACAGCGTAAGCAAAGGCGA
TTTCCAATCGCTGCGCGACAGTTGCCTGGCTAATGGAACCATGTTCGAGG
ATCCCGATTTTCCGGCCACCAACGCTTCGCTGATGTACTCACGACGACCG
GATCGCTACTACGAGTGGCTGCGTCCCGGTGACATCGCCGATGATCCGCA
GTTCTTCGTGGAAGGCTATTCACGATTCGATGTGCAACAAGGAGAACTTG
GCGATTGCTGGCTACTGGCTGCAGCTGCCAATTTGACGCAGGACTCGACG
CTCTTCTTTAGGGTAATCCCGCCGGATCAGGACTTCCAGGAGAACTACGC
TGGCATCTTTCACTTCAAGTTTTGGCAGTATGGCAAGTGGGTGGAAGTGG
TCATTGATGACCGTCTGCCCACCTATAATGGCGAGCTAATCTACATGCAC
TCCACGGAGAAGAACGAGTTTTGGAGTGCCTTGCTGGAGAAGGCTTATGC
AAAGCTGCATGGATCTTATGAAGCACTCAAGGGCGGCACCACGTGCGAGG
CCATGGAGGACTTTACTGGCGGCGTCACCGAGTGGTACGACATCAAGGAG
GCGCCCCCAAATCTATTCAGCATCATGATGAAGGCCGCCGAGCGTGGCTC
GATGATGGGCTGCTCTTTGGAGCCGGATCCACATGTTCTGGAAGCGGAGA
CGCCACAAGGTTTGATTCGCGGTCATGCATACTCCATTACCAAGGTGTGC
CTCATGGACATATCGACGCCCAATCGGCAGGGAAAATTGCCCATGATACG
TATGCGTAATCCATGGGGCAACGATGCCGAATGGAGCGGTCCGTGGAGCG
ACAGCTCGCCTGAGTGGCGATTTATTCCGGAGCACACGAAGGAGGAGATT
GGCCTGAATTTCGATAGGGACGGCGAGTTCTGGATGTCCTTCCAGGACTT
CCTCAATCATTTTGATCGCGTGGAGATATGTAATTTGTCGCCCGACTCGC
TGACTGAGGATCAGCAGCACAGCTCTCGCCGCAAGTGGGAAATGTCCATG
TTCGAGGGTGAGTGGACATCGGGAGTAACAGCCGGCGGTTGCAGAAACTT
CCTGGAAACCTTCTGGCACAATCCGCAGTACATCATTTCGCTGGAGGATC
CCGACGACGAGGATGACGATGGCAAATGCACGGCTATTGTGGCCCTTATG
CAGAAGAATCGACGTAGCAAGCGCAACGTGGGCATCGACTGTCTGACCAT
CGGATTTGCTATATATCATCTCACAGACCGTGACATGCAAGTGAAGCCCC
AGGGACTCAACTTCTTCAAGTACCGAGCATCGGTGGCGCGTTCACCACAT
TTTATCAACACGCGCGAGGTTTGCGCCCGGTTTAAGTTGCCACCTGGCCA
CTACCTGATTGTTCCATCGACCTTCGATCCGAATGAGGAGGGCGAGTTCA
TTATTCGCGTCTTCTCGGAGACAAGGAACAATATGGAGGAGAACGACGAT
GAGGTTGGCTTTGGCGAGACCGACGATCGCATTGCTCCGTCTCTGCCGCC
ACCGACTCCAAAGGAGGAGGATGATCCGCAGCGCATTGCACTGCGTCGTC
TGTTCGACAGCGTGGCTGGCAGCGATGAGGAAGTCGACTGGCAGGAGCTG
AAGCGCATCCTGGACCACTCTATGCGCGATGTTATGGTGGGCAGTGATGG
CTTCTCCAAGGATGCCGTGCGTTCGATGGTAGCCATGCTGGACAAGGATC
GCTCCGGTCGCCTTGGTTTCGAGGAGTTCGAAGCTCTGCTTACCGATATT
GCCAAGTGGCGGGCGGTCTTTAAGCTATATGACACCCGTCGCACTGGCAG
TATTGATGGATTCCATCTGCGCGGAGCACTCAATTCGGCTGGCTATCATC
TGAACAACCGGCTCCTGAACGCCCTGGCCCATCGCTACGGATCGCGGGAG
GGACAAATACCATTCGACGATTTCCTGATGTGTGCCATCAAGGTTAGAAC
ATTCATCGAGATGTTCCGCGAACGGGACACGGACAATTCGGACACGGCCT
TCTTCAACTTGGACGACTGGCTGGAGCGAACAATTTACTCTTAAAAGCTT
TCTAGACCAT
BS21585.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:38:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CalpB-RB | 2778 | CG8107-PB | 1..2778 | 17..2794 | 13890 | 100 | Plus |
| CalpB-RA | 2778 | CG8107-PA | 1..2778 | 17..2794 | 13890 | 100 | Plus |
| CalpA-RC | 2487 | CG7563-PC | 239..1687 | 768..2216 | 1980 | 75.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:38:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CalpB-RB | 3624 | CG8107-RB | 181..2959 | 17..2795 | 13895 | 100 | Plus |
| CalpB-RA | 4274 | CG8107-RA | 523..3301 | 17..2795 | 13895 | 100 | Plus |
| CalpA-RC | 2889 | CG7563-RC | 376..1824 | 768..2216 | 1980 | 75.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:38:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9890783..9892346 | 1232..2795 | 7820 | 100 | Plus |
| 3L | 28110227 | 3L | 9889284..9890224 | 17..957 | 4705 | 100 | Plus |
| 3L | 28110227 | 3L | 9890290..9890566 | 957..1233 | 1385 | 100 | Plus |
| 2R | 25286936 | 2R | 19427675..19427907 | 1443..1675 | 400 | 78.1 | Plus |
| 2R | 25286936 | 2R | 19427206..19427322 | 1088..1204 | 390 | 88.9 | Plus |
| 2R | 25286936 | 2R | 19427382..19427620 | 1208..1446 | 370 | 77 | Plus |
| 2R | 25286936 | 2R | 19427968..19428260 | 1674..1966 | 355 | 74.7 | Plus |
| 2R | 25286936 | 2R | 19428424..19428523 | 2067..2166 | 230 | 82 | Plus |
| 2R | 25286936 | 2R | 19427015..19427139 | 959..1083 | 205 | 77.6 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:38:16 has no hits.
BS21585.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-17 10:41:58 Download gff for
BS21585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CalpB-RB | 196..2971 | 17..2792 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:19:29 Download gff for
BS21585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CalpB-RA | 523..3298 | 17..2792 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:14:23 Download gff for
BS21585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CalpB-RA | 523..3298 | 17..2792 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:14:23 Download gff for
BS21585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9889284..9890224 | 17..957 | 100 | -> | Plus |
| 3L | 9890291..9890565 | 958..1232 | 100 | -> | Plus |
| 3L | 9890784..9892343 | 1233..2792 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:19:29 Download gff for
BS21585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9882384..9883324 | 17..957 | 100 | -> | Plus |
| arm_3L | 9883391..9883665 | 958..1232 | 100 | -> | Plus |
| arm_3L | 9883884..9885443 | 1233..2792 | 100 | | Plus |
BS21585.pep Sequence
Translation from 16 to 2793
> BS21585.pep
MYGIDNYPKNYHASGIGLVNLAALGYSKNEVSGGNEGGGAPKPKAGLYPS
LPYPSSESVGGMPYVVKQTSHAQNASYAGPTMGMGMPVPEAPSAPAPYPS
ATPYPGSGLYPSLPSANVSSLPYPTAPMAPYPTGMPYPTGMPQPNLPYPA
APLAPYPSAMPGLPGMPMPYAPMPTSPAPQHNIGFPALPYPTAPPPESAP
TQEEEPSVGVAELSFTSVKVPENQNMFWMGRKATSARQNSVSKGDFQSLR
DSCLANGTMFEDPDFPATNASLMYSRRPDRYYEWLRPGDIADDPQFFVEG
YSRFDVQQGELGDCWLLAAAANLTQDSTLFFRVIPPDQDFQENYAGIFHF
KFWQYGKWVEVVIDDRLPTYNGELIYMHSTEKNEFWSALLEKAYAKLHGS
YEALKGGTTCEAMEDFTGGVTEWYDIKEAPPNLFSIMMKAAERGSMMGCS
LEPDPHVLEAETPQGLIRGHAYSITKVCLMDISTPNRQGKLPMIRMRNPW
GNDAEWSGPWSDSSPEWRFIPEHTKEEIGLNFDRDGEFWMSFQDFLNHFD
RVEICNLSPDSLTEDQQHSSRRKWEMSMFEGEWTSGVTAGGCRNFLETFW
HNPQYIISLEDPDDEDDDGKCTAIVALMQKNRRSKRNVGIDCLTIGFAIY
HLTDRDMQVKPQGLNFFKYRASVARSPHFINTREVCARFKLPPGHYLIVP
STFDPNEEGEFIIRVFSETRNNMEENDDEVGFGETDDRIAPSLPPPTPKE
EDDPQRIALRRLFDSVAGSDEEVDWQELKRILDHSMRDVMVGSDGFSKDA
VRSMVAMLDKDRSGRLGFEEFEALLTDIAKWRAVFKLYDTRRTGSIDGFH
LRGALNSAGYHLNNRLLNALAHRYGSREGQIPFDDFLMCAIKVRTFIEMF
RERDTDNSDTAFFNLDDWLERTIYS*
BS21585.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:20:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CalpB-PB | 925 | CG8107-PB | 1..925 | 1..925 | 5023 | 100 | Plus |
| CalpB-PA | 925 | CG8107-PA | 1..925 | 1..925 | 5023 | 100 | Plus |
| CalpA-PC | 828 | CG7563-PC | 50..614 | 220..788 | 2506 | 78.9 | Plus |
| CalpA-PB | 828 | CG7563-PB | 50..614 | 220..788 | 2506 | 78.9 | Plus |
| CalpA-PD | 843 | CG7563-PD | 42..629 | 197..788 | 2497 | 75.9 | Plus |
| CalpA-PC | 828 | CG7563-PC | 698..828 | 795..925 | 516 | 67.9 | Plus |
| CalpA-PB | 828 | CG7563-PB | 698..828 | 795..925 | 516 | 67.9 | Plus |
