BS21590.complete Sequence
1175 bp assembled on 2011-01-18
GenBank Submission: KX805065
> BS21590.complete
GAAGTTATCAGTCGACATGAATGCCAAGCGCGTGAAGTATTCCATGGTGA
AGGAGGAGATCGTGCCCGTGCTTATCGAGCAAGATACCGAGGTTGATCCC
GAGGAGGAGCCCGAGGAGGATGAGGAGCACGTTCAAGAAGATGACGGCCA
GGAGACGCAATATACGTATGCCTATACCACCGGCGACGACGATGACACCG
AAACTGCGGTGGTGACCCTCAGCGATCGTGACCACGAGGCGCTGGTCAAT
GCCGAGGAGGTGATTATCGATGAGAACGGTCACGCGGTGACCCTGCAGGA
GCTGGTCGAGAACAGCACCGTCGAGGAGGAGACCATCGAACAGGGCGATG
GTACACACACCATCCTTCATATTGTGCCCAATATTCATGGCGAGGAGGTC
GAGGAGGATGAAGAGCTCGAGGATGGCGAGGAGGTAGAGCATGACGATGA
GTTTGTCACCGTCGACCACGAGGGCGGCGAATTGGAGGTTGAAGATGACG
AGGTGGGCTCTATTGTGTTCGAGAGTACCATCGACCATGCCGAACAAGAT
CCGTATGGTCGCAACAAGACCTTCTACTGTCCCAATTGCGGCAATTGCTA
CAGCGCCGCCGGCTCCCTGAAGCTTCATATGCGCGCCTGCCTGCGGCAGA
GGAACGAGATCTCCACCGATGAACGCAAGTGCAAAGTGTGCAGCAAGGTC
TTCAACTCGGTTGCCTACCTCAAGGAGCATATGATGCGGCACACGGGCGA
GCAGCCCTTCCGCTGCACCCGCTGCTATCGCAAGTTCGTCGAGGAGAGCA
AATTTACCGCCCACATGGAGTCGCACAAGCACCAGGACAAGCTCGAGGCC
GAAGCGGTGGCCCTGGCCGCCCAGCACGGCGGCAAGAAGGTGGTCGTCAA
GGAGTTCCAGTGCGCCTTCTGCTCGCAGAACTTCACCGTCGTCTTCGATG
TTGGCCAGGTGAAGAGACGCTATGCCTGCGACGCCTGCCGCGATAAGTAC
TCTAATGCGGAGGCACTGCGGCAGCACAAGCAGCAGGTGGAGGAGAAGCG
CGAGTTCAGCTGCGTACGTTGCGGCCGCAAGTTCGTTTTCGAGGGCTTCC
TACAGCGCCATCTGCCCACCTGCGATGGCAGCATCAAGCGTCGAAGGGAC
ATGAAGTAGAAGCTTTCTAGACCAT
BS21590.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:21:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3847-RA | 1143 | CG3847-PA | 1..1143 | 17..1159 | 5715 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:21:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3847-RA | 2134 | CG3847-RA | 398..1546 | 12..1160 | 5730 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:21:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6347500..6348648 | 12..1160 | 5730 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:21:26 has no hits.
BS21590.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:20 Download gff for
BS21590.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3847-RA | 403..1545 | 17..1159 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:54:30 Download gff for
BS21590.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3847-RA | 403..1545 | 17..1159 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:13 Download gff for
BS21590.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3847-RA | 403..1545 | 17..1159 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:13 Download gff for
BS21590.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6347505..6348647 | 17..1159 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:54:30 Download gff for
BS21590.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6241538..6242680 | 17..1159 | 100 | | Plus |
BS21590.pep Sequence
Translation from 16 to 1158
> BS21590.pep
MNAKRVKYSMVKEEIVPVLIEQDTEVDPEEEPEEDEEHVQEDDGQETQYT
YAYTTGDDDDTETAVVTLSDRDHEALVNAEEVIIDENGHAVTLQELVENS
TVEEETIEQGDGTHTILHIVPNIHGEEVEEDEELEDGEEVEHDDEFVTVD
HEGGELEVEDDEVGSIVFESTIDHAEQDPYGRNKTFYCPNCGNCYSAAGS
LKLHMRACLRQRNEISTDERKCKVCSKVFNSVAYLKEHMMRHTGEQPFRC
TRCYRKFVEESKFTAHMESHKHQDKLEAEAVALAAQHGGKKVVVKEFQCA
FCSQNFTVVFDVGQVKRRYACDACRDKYSNAEALRQHKQQVEEKREFSCV
RCGRKFVFEGFLQRHLPTCDGSIKRRRDMK*
BS21590.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:06:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3847-PA | 380 | CG3847-PA | 1..380 | 1..380 | 2025 | 100 | Plus |
| CG15710-PA | 265 | CG15710-PA | 53..247 | 186..380 | 321 | 35.3 | Plus |
| Neu2-PB | 308 | CG7204-PB | 1..277 | 65..366 | 226 | 23.4 | Plus |
| Neu2-PA | 382 | CG7204-PA | 1..277 | 65..366 | 226 | 23.4 | Plus |
| CG6654-PA | 639 | CG6654-PA | 385..576 | 188..371 | 226 | 28.9 | Plus |
