BS21592.complete Sequence
1703 bp assembled on 2011-02-17
GenBank Submission: KX801904
> BS21592.complete
GAAGTTATCAGTCGACATGAGTGCGAACCTGAAGAATATCAAACTGGCCC
ACTTCAGTGGTTCGCTCGGTTCCGGTGGCTTTGGCATCTCTGCGTCATCC
GGAGGAGCTGGAAAACTGCCCACAAATGGCACAGGTGGCGGCAAATCCGC
CCCAACGAGCACCTTCCTGGACTCCGAGGTGCTGGCCACGCCCGGCGGCG
TCGTTATACCAATAATTCGCACTCGGGACGTGCCCAAATTGCTGCCCACC
ATTGCAGCGGCACTGCAGCGTCCGGCGGATGATCATTTGGCGGCCGAGGA
TCTGGATGCAGTGCAACTGGAGCTGGAACAGATGCTCTCCAATGTGGCGC
TGCGCACGCGCGTCCTGAAAGCGGAGTATGATAGCCTCGACAAGGATGAG
AAGCGCCAGGATCGAAGAAAGCTCGACCGTGTGCCTGGATCGCCACCTTG
TCCGGCTAGCATGCTCAACGGCTTGCTGGGCATCGGCAGCAACTCGTCGA
CGAGTCTGGGCAGCCCGCTGGGCGGCGGAGGCGCCTCATCCTCTAGCCAA
TCGAAGCGCAAGCGGGATGAGCCAACGGGCGTGCGCAAAAAGCACTCTTC
GATGACCATTCTCAAGCAACAGGGCGTTTCCGGCGGCACCTCGAAGCACC
AGGCCAAGAACAGCCCCTTGGTCGTGCACACCGACGACAGCATGGACTAT
CTGCCCACACTGGCGGCCGCCAATGCCTCTGGATCCGTGCTGCCGCATCA
CCAGCCGCTGCCGCAGCTACCGAAAATGACGGTGCCCAAGAACGATACGC
CCAACAAGTTCTGGCTATCCGTGGAGCCCTACTGCATGCCTCTAACCAAC
GAGGATCTGCGCCTAATCGATGACCTGCTGGAGCAGTATTGGGGTCCACT
GGTGCCGCCAGTGCCACCTCTGGGTCCCCACTACTCCACAGTTTGGGCCC
AGGAGGATATAAAGGCGCTGCAGCCGGGCGGAGCTCGAATTAAATCGAAC
AATTCCAGCGGAATGCTCAAAAAGGCCGAAGGCATGGTGGATGAGAGCAT
CACTGGTCCACTCACCCAGCGTTTGGTGTCCGCCTTAATGGAGGAGTCCC
TGATGACGCTGCCCAGCGAACAGGCCGCCGTGGGCGAGCACAGCAACAGC
ACCACGAGCAGCAGCAACGAGAACACCCACTCGCACTCCTCGTCCTCGGC
AAATGCTGCCGCAGCAGCTGCTTCCGGGAACTTTCGATCTCTCGCCATGA
TGAAACACGGCGTGGGCATCGAACAGCGCCTGAAGAAGACTCTCATCGAG
AACGGACTGATCGATGCCAGTGAGTTTGCGGCCCACGAAGACGTGGACGA
GGTGCTGATGGAGATCAAGCGCGTAACGACCGAAATCAGCACCATTTCGC
AGTTTAACAGCGAGGAATTGAAGCGACTGCGTGCCGTTGCCAGTGAGGAA
ATCAAGCGCATTGCCATCAAACAGAAATTGGACATGGTGGACCAGGAGAT
ACTCGAGTGCTACAAGCGAATGCTGCAGTATCGGGCCAAGCGCAAGGGCC
ACACCATCGAGGAGAAGCAGGAGATACTGCGGCTGACCAACGAGCAGCGC
CTACTTGCGGATCAGCTGGAGCGTATGCAGATGCATCTGCCCTGCATCGG
CGGCTCCGGCAACTCCCTGTTAGAGCCAAAGATGTAGAAGCTTTCTAGAC
CAT
BS21592.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:39:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dik-RC | 1767 | CG7098-PC | 1..1671 | 17..1687 | 8355 | 100 | Plus |
| dik-RA | 1671 | CG7098-PA | 1..1671 | 17..1687 | 8355 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:39:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dik-RC | 2658 | CG7098-RC | 151..1822 | 16..1687 | 8360 | 100 | Plus |
| dik-RA | 2658 | CG7098-RA | 151..1822 | 16..1687 | 8360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:39:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18085911..18087582 | 16..1687 | 8360 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 07:39:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2475..2567 | 1129..1219 | 136 | 62.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6777..6857 | 1137..1218 | 136 | 67.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6810..6890 | 1137..1218 | 136 | 67.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6735..6818 | 1137..1218 | 135 | 67.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6756..6839 | 1137..1221 | 133 | 66.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1536..1578 | 1135..1177 | 125 | 76.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2356..2400 | 1137..1180 | 123 | 77.8 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1116..1154 | 1137..1174 | 120 | 82.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2381..2466 | 1140..1221 | 115 | 61.6 | Plus |
| TART-A | 13424 | TART-A 13424bp | 10448..10496 | 1228..1178 | 115 | 72.5 | Minus |
BS21592.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-17 10:41:59 Download gff for
BS21592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dik-RA | 155..1825 | 17..1687 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:19:47 Download gff for
BS21592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dik-RA | 155..1825 | 17..1687 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:14:39 Download gff for
BS21592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dik-RA | 152..1822 | 17..1687 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:14:39 Download gff for
BS21592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18085912..18087582 | 17..1687 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:19:47 Download gff for
BS21592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17979945..17981615 | 17..1687 | 100 | | Plus |
BS21592.pep Sequence
Translation from 16 to 1686
> BS21592.pep
MSANLKNIKLAHFSGSLGSGGFGISASSGGAGKLPTNGTGGGKSAPTSTF
LDSEVLATPGGVVIPIIRTRDVPKLLPTIAAALQRPADDHLAAEDLDAVQ
LELEQMLSNVALRTRVLKAEYDSLDKDEKRQDRRKLDRVPGSPPCPASML
NGLLGIGSNSSTSLGSPLGGGGASSSSQSKRKRDEPTGVRKKHSSMTILK
QQGVSGGTSKHQAKNSPLVVHTDDSMDYLPTLAAANASGSVLPHHQPLPQ
LPKMTVPKNDTPNKFWLSVEPYCMPLTNEDLRLIDDLLEQYWGPLVPPVP
PLGPHYSTVWAQEDIKALQPGGARIKSNNSSGMLKKAEGMVDESITGPLT
QRLVSALMEESLMTLPSEQAAVGEHSNSTTSSSNENTHSHSSSSANAAAA
AASGNFRSLAMMKHGVGIEQRLKKTLIENGLIDASEFAAHEDVDEVLMEI
KRVTTEISTISQFNSEELKRLRAVASEEIKRIAIKQKLDMVDQEILECYK
RMLQYRAKRKGHTIEEKQEILRLTNEQRLLADQLERMQMHLPCIGGSGNS
LLEPKM*
BS21592.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:20:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dik-PC | 588 | CG7098-PC | 1..556 | 1..556 | 2821 | 100 | Plus |
| dik-PA | 556 | CG7098-PA | 1..556 | 1..556 | 2821 | 100 | Plus |
