BS21596.complete Sequence
764 bp assembled on 2011-01-18
GenBank Submission: KX801693
> BS21596.complete
GAAGTTATCAGTCGACATGGCGGACGACTTGCATAATTATAAGCTACAAT
TGCAACAAGTGGAGGCAGCTCTTCAAACTGATCCAGAAAATGAAGAGCTA
TTAAAACTCAGAAGTGATCTTGACGAAGTTATTACCCTTACTCGTGATTT
GATACAAACTCAACTGGAAGAACAAAATAAATCTTCATATGTGGAGCCAT
CATCAACCAAAAGAGATTCGTCCAACTACTTCGACGAAATAGAAGCAGCT
CTATTAGAAGCAGAAAAATTAGTTTCAGCTGCTAAGATTTGGAAAAAAGG
AGACAAGTGTCAAGCTAAATGGAAGGAGGATCGTCAGTACTACGATGCAA
CTATTGAAGATATATCAAGTACAGGAGAAGTTAATGTAATATTCGATGCC
TATCAAAATCGATCTACGACCCACGTCAATGAGTTGCGTGAACGTACTAT
TCGCAACGAAGTTTTTCCGTCAAACAAGCGGCACAGGCCCAATCAAAAAG
AATATTTAAAAAAACGTAAGCAAAAAAAGCAACAGCGCTTCAAGGACTTG
GAAGAGGAACGTGAATCAGACAAGAACAAATGGCTTAATTTTAACAACAA
AAACCAAAAAAAAAACGGAATGAAAGCAAGAAGTATATTTGCGTCTCCGG
ATAATGTAAGCGGCAGAGTAGGAGTCGGCACTTGTGGAACTGCAGGAAAG
GGCATGACAGATTTTACTGTGGGTGAAAAATATAGAAAAGGTCTTTAGAA
GCTTTCTAGACCAT
BS21596.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:21:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17454-RA | 732 | CG17454-PA | 1..732 | 17..748 | 3660 | 100 | Plus |
CG17454-RB | 693 | CG17454-PB | 4..693 | 59..748 | 3450 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:21:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17454-RA | 880 | CG17454-RA | 103..836 | 17..750 | 3670 | 100 | Plus |
CG17454-RB | 1163 | CG17454-RB | 428..1119 | 59..750 | 3460 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:21:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 23715902..23716321 | 59..478 | 2100 | 100 | Plus |
3L | 28110227 | 3L | 23716369..23716645 | 474..750 | 1370 | 99.6 | Plus |
3L | 28110227 | 3L | 23715125..23715169 | 17..61 | 225 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:21:16 has no hits.
BS21596.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:19 Download gff for
BS21596.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17454-RA | 101..832 | 17..748 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:54:27 Download gff for
BS21596.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17454-RA | 103..834 | 17..748 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:10 Download gff for
BS21596.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17454-RA | 103..834 | 17..748 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:10 Download gff for
BS21596.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 23715125..23715166 | 17..58 | 100 | -> | Plus |
3L | 23715902..23716320 | 59..477 | 100 | -> | Plus |
3L | 23716373..23716643 | 478..748 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:54:27 Download gff for
BS21596.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 23708225..23708266 | 17..58 | 100 | -> | Plus |
arm_3L | 23709002..23709420 | 59..477 | 100 | -> | Plus |
arm_3L | 23709473..23709743 | 478..748 | 100 | | Plus |
BS21596.pep Sequence
Translation from 16 to 747
> BS21596.pep
MADDLHNYKLQLQQVEAALQTDPENEELLKLRSDLDEVITLTRDLIQTQL
EEQNKSSYVEPSSTKRDSSNYFDEIEAALLEAEKLVSAAKIWKKGDKCQA
KWKEDRQYYDATIEDISSTGEVNVIFDAYQNRSTTHVNELRERTIRNEVF
PSNKRHRPNQKEYLKKRKQKKQQRFKDLEEERESDKNKWLNFNNKNQKKN
GMKARSIFASPDNVSGRVGVGTCGTAGKGMTDFTVGEKYRKGL*
BS21596.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:06:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17454-PA | 243 | CG17454-PA | 1..243 | 1..243 | 1258 | 100 | Plus |
CG17454-PB | 230 | CG17454-PB | 2..230 | 15..243 | 1184 | 100 | Plus |