BS21608.complete Sequence
926 bp assembled on 2011-01-18
GenBank Submission: KX802243
> BS21608.complete
GAAGTTATCAGGCGACATGAAATATATTCGGGAAATCTTTTCAATCGCTC
TTCTTCTGACAGAAGTCGGAGCTGCACACTCTAGTTGGTGGAATTCTTCA
GCCTCGTACTTGCATGGCAGGCCACCAGTGAGAACATTGAACAAGAATGG
AATTCGTCGAACCTCGGGTGGTCATGCGGTCCCTTGGCTATTAAGGATAG
TTGATGGACCTACTTTCGTCTGCGGAGCCTCGTACTTAAGTGCTTTGTAT
GCCCTCACCTCAGCAAACTGTATGCATAGTCATAGGTCACAGATGGAGTC
GCTCAGTGTGGAGTTGGTATCGTCGGACAGCCGGCAGGATAATCAGCTTG
ATTCGCATGATCCTCCAAACGCCCTTATCCGCAACATAATCGTTTCGAAG
GATTGGCACTGGCCTGGAACTTTTATGGATGTCGCTGTCATAGAACTGAC
CAACCGCCTGCGTGGCAATCGGAATAACTATGTTACCCTCTGTACCAATC
CGCTGAGCTCGTACAAAAGCCTTTCCGTTGTGTCCTACGGCGCAGGACCC
GCGGAAAACGTACGAACAGAAGAAATTGAGGTGCTCAACCGAATGATCTG
CGATTCGGCGTACGGCAATTTTCTTCTGCGCGAAACTGTCGCCTGTGCCA
AGGAATTTAAAAGGAGCGCAGACTGTATGTTTAGCGCCGGATGTCCTGTG
ACTGCTGGAGATCAGCTTTGTGGTATCGTCGCCTGGAGTCCCGCCTGCAA
GAGATCCAATTTACCAGGGATCTTCACCGATATCCATCAGGTTAAACGAT
TCATTCTGAAGGCGATCAGTGGAAAGCATAAGGGCACTAGCCATCCAAAA
ACGGAACGGGCATCAGATAACGTACCCGAGTGGCACTCGGGTCTCTGGCT
AAGTCGTTAAAAGCTTTCTAGACCAT
BS21608.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:21:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34130-RA | 894 | CG34130-PA | 1..894 | 17..910 | 4470 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:21:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34130-RA | 974 | CG34130-RA | 18..911 | 17..910 | 4470 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:21:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26189067..26189960 | 910..17 | 4470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:21:35 has no hits.
BS21608.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:21 Download gff for
BS21608.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34130-RA | 18..909 | 17..908 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:54:33 Download gff for
BS21608.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34130-RA | 18..909 | 17..908 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:18 Download gff for
BS21608.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34130-RA | 18..909 | 17..908 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:18 Download gff for
BS21608.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26189069..26189960 | 17..908 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:54:33 Download gff for
BS21608.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22014791..22015682 | 17..908 | 100 | | Minus |
BS21608.pep Sequence
Translation from 16 to 909
> BS21608.pep
MKYIREIFSIALLLTEVGAAHSSWWNSSASYLHGRPPVRTLNKNGIRRTS
GGHAVPWLLRIVDGPTFVCGASYLSALYALTSANCMHSHRSQMESLSVEL
VSSDSRQDNQLDSHDPPNALIRNIIVSKDWHWPGTFMDVAVIELTNRLRG
NRNNYVTLCTNPLSSYKSLSVVSYGAGPAENVRTEEIEVLNRMICDSAYG
NFLLRETVACAKEFKRSADCMFSAGCPVTAGDQLCGIVAWSPACKRSNLP
GIFTDIHQVKRFILKAISGKHKGTSHPKTERASDNVPEWHSGLWLSR*
BS21608.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:06:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34130-PA | 297 | CG34130-PA | 1..297 | 1..297 | 1582 | 100 | Plus |
| CG34129-PA | 314 | CG34129-PA | 43..261 | 45..263 | 287 | 28.6 | Plus |
| Sems-PA | 275 | CG10586-PA | 37..267 | 36..267 | 236 | 27.6 | Plus |
| CG11037-PA | 292 | CG11037-PA | 61..285 | 48..267 | 211 | 26.6 | Plus |
| CG3650-PA | 249 | CG3650-PA | 49..247 | 66..267 | 210 | 29.5 | Plus |
