BS21639.complete Sequence
572 bp assembled on 2011-01-18
GenBank Submission: KX800496
> BS21639.complete
GAAGTTATCAGTCGACATGAAAATAGTGCTGGTTATTTGGATGCTAGCTC
ACTCACTTCAGCCGCCTTATCAATGTGATGCTGTCATTTTCAAAATGACC
AATGCAGTATGTGAGACCTATAACAAATCCTGGGTGGAATTCGGGTTGTG
CCGCCTGCGTGCTGTTAGCAGGAATAAGGTTTGCCTCAATGTCGATGCCA
ATTTGCTGCATCCGGTTCACGATGTCATAGTCAAGGCCAGATTGCTGAAG
AGGGCCAATGGCTATAAGCCTTGGCTATATAGCGTCAGTTTCGACGGCTG
TCAGTTTATAAGGCGGAGAAATAATGCCTTGATTCGGATCGTTTGGGAGC
TCTTCAAAGAGTACTCGACGATCAATCACACCTGTCCCTATGTGGGCCTG
CAGCAAGTCAAGAACTTCTATCTCAGGTCCGAGAAGCTGCCCACGCCCAT
TCCCACTGGAGAATATCTGCTGATGATTGACTGGGTGTTCAACAAGAAAC
CGCAGGCTGCCACAAATGTTTACTTCACATTTGTGGAGGACCTAAAAGAT
AGTTAAAAGCTTTCTAGACCAT
BS21639.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:22:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14518-RA | 540 | CG14518-PA | 1..540 | 17..556 | 2700 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:22:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14518-RA | 625 | CG14518-RA | 1..541 | 16..556 | 2705 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:22:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29025087..29025405 | 77..395 | 1595 | 100 | Plus |
| 3R | 32079331 | 3R | 29025913..29026075 | 394..556 | 815 | 100 | Plus |
| 3R | 32079331 | 3R | 29024971..29025032 | 16..77 | 310 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:22:44 has no hits.
BS21639.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:32 Download gff for
BS21639.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14518-RA | 2..539 | 17..554 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:55:09 Download gff for
BS21639.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14518-RA | 2..539 | 17..554 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:52 Download gff for
BS21639.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14518-RA | 2..539 | 17..554 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:52 Download gff for
BS21639.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29025087..29025404 | 77..394 | 100 | -> | Plus |
| 3R | 29025914..29026073 | 395..554 | 100 | | Plus |
| 3R | 29024972..29025031 | 17..76 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:55:09 Download gff for
BS21639.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24850694..24850753 | 17..76 | 100 | -> | Plus |
| arm_3R | 24850809..24851126 | 77..394 | 100 | -> | Plus |
| arm_3R | 24851636..24851795 | 395..554 | 100 | | Plus |
BS21639.pep Sequence
Translation from 16 to 555
> BS21639.pep
MKIVLVIWMLAHSLQPPYQCDAVIFKMTNAVCETYNKSWVEFGLCRLRAV
SRNKVCLNVDANLLHPVHDVIVKARLLKRANGYKPWLYSVSFDGCQFIRR
RNNALIRIVWELFKEYSTINHTCPYVGLQQVKNFYLRSEKLPTPIPTGEY
LLMIDWVFNKKPQAATNVYFTFVEDLKDS*
BS21639.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:07:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14518-PA | 179 | CG14518-PA | 1..179 | 1..179 | 965 | 100 | Plus |
| CG33725-PC | 175 | CG33725-PC | 17..172 | 21..176 | 499 | 55.8 | Plus |
| CG33725-PA | 181 | CG33725-PA | 23..178 | 21..176 | 499 | 55.8 | Plus |
| CG13589-PA | 174 | CG13589-PA | 21..174 | 21..176 | 474 | 51.3 | Plus |
| CG13590-PA | 193 | CG13590-PA | 5..174 | 7..176 | 468 | 49.4 | Plus |
