BS21640.complete Sequence
1151 bp assembled on 2011-01-18
GenBank Submission: KX805283
> BS21640.complete
GAAGTTATCAGTCGACATGCTGTTAAACGATATCATAAGCGGAAAATTAG
TTGATTCCGTCTATATTATAGCGGAAATTGGCCAAAATCACCAAGGTTGT
GTGGAAACAGCGAAGAAAATGATATGGGAGGCCAAAAAAGCCGGTTGCCA
CTGCGTCAAGTTTCAAAAATCGGATTTGCCAGCAAAGTTTACGAGATCCG
CTCTAGATCGCGAATATATCAGTGATCACGCCTGGGGAAAAACGTACGGG
GAGCACAAGGAGTACCTGGAGTTCTCCAAAGATCAGTATCTCCAGCTGCA
GGCCCACTGCAAGGAGTTAAATGTGGACTTTACGGCTTCCGCCATGGATG
AGAGATCGTTGGAGTTCCTTTCTGCTCTAAATGTTCCCTTCATCAAAATT
GGTTCCGGAGACGCAAACAACTTTCCGCTTCTCAAAAAGGCCGCCAATTT
GAACTTGCCCCTGGTGATCTCCACCGGAATGCAGACTATGCAAACTGTGG
AGAGGATTGTGCAAACTATGCGGGAGTCAGGAAAAGAGGACTACGCTCTA
ATGCACTGCGTTTCATCGTACCCAACTGACCCAAAAGATTGCAGCTTGCA
GTTGATATCCGTCTTAAGGACACGCTTTCCCAATGTGGCAATTGGGTACT
CGGGTCATGAGCTGGGAGTGATCATTAGCCAGGCCGCCGTCTTGCTGGGA
GCACGCATAGTGGAGCGCCACTTTACGCTGGACAAGAGTCAGAAGGGCTC
CGATCATCGCTGCTCCCTAGAGCCGCAAGAATTAAAAGCTCTGACTACAG
CCATCACCAACTTCAAACTCTCTTCAGTTCCCATGCCTCCACAAGAAATA
GTTAAAAAGTTAAATGGAGATGAGGAACTAGAGGCAGCTCTTCAGCACGT
TGAGTCTAAAACCATTTTGCCGTGCGAGCTGCCCTGCCGAAATAAACTGG
GCAAATCTATTGTGGCAGCTAGGAATCTCAATAAGGGTTACAGGTTGCAA
TTGGCAGATATGGCCATTAAAGTCAGTGAACCCAGCGGCCTGACAGCGGA
GGATTTCTTGGACTTGGTAGGCAAGGAATTGGCAGACAATATTGGTGAGG
ATGAACCCATACTTGGGAATAGTATAATCAATTGAAAGCTTTCTAGACCA
T
BS21640.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:22:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sas-RA | 1119 | CG5232-PA | 1..1119 | 17..1135 | 5595 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:22:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sas-RA | 1194 | CG5232-RA | 35..1154 | 17..1136 | 5600 | 100 | Plus |
| CG5641-RA | 1365 | CG5641-RA | 1323..1365 | 1136..1094 | 215 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:22:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12427052..12427837 | 351..1136 | 3930 | 100 | Plus |
| 3R | 32079331 | 3R | 12426612..12426947 | 17..352 | 1680 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:22:48 has no hits.
BS21640.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:33 Download gff for
BS21640.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sas-RA | 35..1152 | 17..1134 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:55:10 Download gff for
BS21640.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sas-RA | 35..1152 | 17..1134 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:54 Download gff for
BS21640.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sas-RA | 35..1152 | 17..1134 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:54 Download gff for
BS21640.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12426612..12426947 | 17..352 | 100 | -> | Plus |
| 3R | 12427054..12427835 | 353..1134 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:55:10 Download gff for
BS21640.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8252334..8252669 | 17..352 | 100 | -> | Plus |
| arm_3R | 8252776..8253557 | 353..1134 | 100 | | Plus |
BS21640.pep Sequence
Translation from 16 to 1134
> BS21640.pep
MLLNDIISGKLVDSVYIIAEIGQNHQGCVETAKKMIWEAKKAGCHCVKFQ
KSDLPAKFTRSALDREYISDHAWGKTYGEHKEYLEFSKDQYLQLQAHCKE
LNVDFTASAMDERSLEFLSALNVPFIKIGSGDANNFPLLKKAANLNLPLV
ISTGMQTMQTVERIVQTMRESGKEDYALMHCVSSYPTDPKDCSLQLISVL
RTRFPNVAIGYSGHELGVIISQAAVLLGARIVERHFTLDKSQKGSDHRCS
LEPQELKALTTAITNFKLSSVPMPPQEIVKKLNGDEELEAALQHVESKTI
LPCELPCRNKLGKSIVAARNLNKGYRLQLADMAIKVSEPSGLTAEDFLDL
VGKELADNIGEDEPILGNSIIN*
BS21640.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:00:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sas-PA | 372 | CG5232-PA | 1..372 | 1..372 | 1910 | 100 | Plus |
