BS21653.complete Sequence
818 bp assembled on 2011-01-18
GenBank Submission: KX801059
> BS21653.complete
GAAGTTATCAGTCGACATGGATTTCAAGAAGCTGAAGAAAATGGAGGAGG
TGGTGCGCATCGGCGGCAAAGGATCTATGCGCCGCAAGCATAAGAGATTC
CCATCCTCGGCTGCGGCCGAGAAGCGCGTGCAAGCCACATTGGCCATGTT
GCCGTTGAAGAATATCGACGAAATCGAGGAGGTGACCATCGAGTTCACCA
ATTCCAGTAAGGTTGTGTTAACCATGCCCAGGGTTCAGAGCACCGCTGGC
AATTCTTTCTTCGTGGTTAGTGGCGATTTCGTGCGCAAGTCGTCAACAGC
TGGCCCATCGAAAGTGGCCAAGGCAGCCAATGCGCCCAAGGCACCCATGC
CACCTAAGCCACCCAAGCCGGAAGCTTTTTCCGACAAAAAGCCAGAATCA
GAGGAGTCCATTAAGGTGGCCAAGAAGCCCAAGAAGCCGCGCAATCGTGT
TCGTCCTCGCAACAAGAAGGTCCAAATGATGCTCTCCAAAAACAAAGAGG
ACGCAGCCATGGCTGGCTGGGATTCGGAGCCGAAGCTTAGCAATGGTAAA
CCAATTTTGATCTCCTCTGAAGATGGCAGCGATCCGGATAATGAGAAGGT
GCCATCGGATGAGTCTGATGTGGATCGGACCATAGTCTGCGACAAAGATT
CGCTGGGAAGCTTCGGCGATGATTCCGACGGCAAGGAGGACGTTGACACT
ACGGAGTCGATCTACCTGTCCTCCTACTCCAATTACTATTATTTGACGGA
GCAGCTCTATCCAAATACTTATCGCGTTCAGGTCTCAGAGGACGAAGATT
AGAAGCTTTCTAGACCAT
BS21653.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:22:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| betaNACtes1-RA | 786 | CG13402-PA | 1..786 | 17..802 | 3930 | 100 | Plus |
| betaNACtes3-RA | 789 | CG32601-PA | 1..789 | 17..802 | 2935 | 91.8 | Plus |
| betaNACtes6-RA | 789 | CG32598-PA | 1..789 | 17..802 | 2890 | 91.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:22:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| betaNACtes1-RA | 1084 | CG13402-RA | 101..886 | 17..802 | 3930 | 100 | Plus |
| betaNACtes3-RA | 967 | CG32601-RA | 118..907 | 17..803 | 2940 | 91.8 | Plus |
| betaNACtes6-RA | 967 | CG32598-RA | 118..907 | 17..803 | 2895 | 91.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:22:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14171685..14172470 | 802..17 | 3930 | 100 | Minus |
| X | 23542271 | X | 14378977..14379766 | 17..803 | 2940 | 91.8 | Plus |
| X | 23542271 | X | 14316190..14316979 | 803..17 | 2895 | 91.4 | Minus |
| X | 23542271 | X | 14380865..14381356 | 318..803 | 1670 | 90.2 | Plus |
| X | 23542271 | X | 14314701..14315021 | 803..486 | 1150 | 91.3 | Minus |
| X | 23542271 | X | 14380507..14380860 | 17..367 | 955 | 85.3 | Plus |
| X | 23542271 | X | 14315096..14315412 | 330..17 | 830 | 84.9 | Minus |
| X | 23542271 | X | 15576746..15576921 | 507..684 | 355 | 82.1 | Plus |
| X | 23542271 | X | 14315018..14315117 | 432..336 | 255 | 86 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:22:53 has no hits.
BS21653.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:34 Download gff for
BS21653.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13402-RA | 101..886 | 17..802 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:55:13 Download gff for
BS21653.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| betaNACtes1-RA | 101..886 | 17..802 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:55 Download gff for
BS21653.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| betaNACtes1-RA | 101..886 | 17..802 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:55 Download gff for
BS21653.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14171685..14172470 | 17..802 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:55:13 Download gff for
BS21653.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14065718..14066503 | 17..802 | 100 | | Minus |
BS21653.pep Sequence
Translation from 16 to 801
> BS21653.pep
MDFKKLKKMEEVVRIGGKGSMRRKHKRFPSSAAAEKRVQATLAMLPLKNI
DEIEEVTIEFTNSSKVVLTMPRVQSTAGNSFFVVSGDFVRKSSTAGPSKV
AKAANAPKAPMPPKPPKPEAFSDKKPESEESIKVAKKPKKPRNRVRPRNK
KVQMMLSKNKEDAAMAGWDSEPKLSNGKPILISSEDGSDPDNEKVPSDES
DVDRTIVCDKDSLGSFGDDSDGKEDVDTTESIYLSSYSNYYYLTEQLYPN
TYRVQVSEDED*
BS21653.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:00:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| betaNACtes1-PA | 261 | CG13402-PA | 1..261 | 1..261 | 1336 | 100 | Plus |
| betaNACtes3-PA | 262 | CG32601-PA | 1..262 | 1..261 | 1137 | 87 | Plus |
| betaNACtes6-PA | 262 | CG32598-PA | 1..262 | 1..261 | 1113 | 85.9 | Plus |
| betaNACtes4-PA | 263 | CG18313-PA | 1..261 | 1..241 | 932 | 75.1 | Plus |
| betaNACtes2-PA | 197 | CG18157-PA | 1..197 | 1..223 | 700 | 68 | Plus |
