BS21693.complete Sequence
1805 bp assembled on 2011-02-17
GenBank Submission: KX804228
> BS21693.complete
GAAGTTATCAGTCGACATGGTGTTGGCGGAGCGCAACACCACGGATGTGG
TGCGCAACGGGCGCCGTTCGCGCGGCCCCAGTCCCAATACGCACACCACG
GGCGGCGTCACCAACAGCGCCAGCCTCGTGGGCAGCGGCAACAACAGCGG
CCACTCCGGGAACGCCAATGCGAACGAGAAGACCACCACAGCTGTGCCAG
GTGCAGGCACGCCGGAGAGCTCCGACGACGACAACTCCACCAAACGGAAC
GGCAAGAGCAAGGCCAAGCAGTCTGAGTACGAAGAGAAAATCCGCGTTGG
ACGCGACTACCAGGCGGTTTGTCCGCCGCTCGTTCCGGAAGCGGAGCGCC
GCCCGGAACAAATGAACGAACGCGCCCTCCTCGTATGGTCGCCCACCAAG
GAGATTCCTGATCTGAAATTGGAGGAGTACATTTCGGTGGCCAAGGAAAA
GTACGGCTACAACGGCGAACAGGCATTGGGCATGCTGTTCTGGCACAAAC
ACGATCTGGAGCGTGCCGTAATGGACCTGGCCAACTTCACGCCCTTCCCG
GACGAGTGGACCATCGAGGACAAGGTGCTGTTCGAACAGGCCTTCCAGTT
CCACGGGAAGAGCTTCCACCGCATCCGCCAGATGCTGCCAGACAAATCCA
TAGCCAGTTTGGTCAAGTACTACTACTCGTGGAAGAAGACGCGTCACCGC
AGCAGCGCCATGGATCGCCAAGAAAAGGCCATCAAGGCGGTGGTCAAGGA
TGGCTCCGAGAACGGCAGCGAGGTGGGCAGCAACGAGGAGTCTGATAACG
ATGACAAGATACAGAAGAATAGGCAAGTAATGGAGCAGCTAGACAAGGAG
TGCGAAACCATCAATGTGGATGATGTGCTTTCCAAGCCGGCGGCAGCCAA
CACCGAATCTGCCCAGCCACGCATCTCTGCCCGTTGGCTGCCGGATGAGA
TCCAAGTGGCATTGCTCGCGATCCGCGAGTATGGAAAAAACTTTCCTACG
ATTGCCAAGGTGGTGGCCACCAAAACGGAGGCGCACGTGCGCACCTTTTA
CTTAAACAATCGGCGCCGCTACAATCTCGACCAGATCGTAAAGGAGTACG
AGGCTGGCAAGTCCGAGGAGTCGGGCGCAGAGGAGCAGACCGAGCCTGCT
GTCGACGCAGCCGCGGCTGGCGCCGCAACAGCATCTGCGCCCAGCGCGGC
TGATTCTACATCCGCCGCGAGCGCGACAGCAGACAGGAAACAGTCCACCG
AAAACAGCAACAACGGAGTTGAGACCATGCAGGAATCGTTGCCCAAGAAG
GAGGACCCTAAGAAGCCGGAGCTGGCAGCGGCTGTGCTCAAGATTGGCGT
GGCCGAGGCAGCAGATGCCGTGGCCACTGTGGCATCCAGCACAGCCTCTG
GCGTCATCGGTGCCGCCACCTCCGCCAGCAAGCCCAGCACCAGTGCTACA
ATCACCATTATAGATGAGTCTGACACGGCCACGAACTCGAGCAGCGACGT
TGTCACCACTGGACTTGCCACATCCACCGGCTCGTCCGCACTGTCCAGCA
CAACTAGTGCGCCCGCATCCAAAACGCAGACCAGCAGCGAGGAGTTGTCC
GCTCAGAAATCCAATCCCGCGAGCGGGATCGCAGCCATAGGTGCTGCAAC
GGGCGGTGGCCAGACTGCCAACAGCTCTGGCAGCAAGCGGGATAGCTCTG
TATTGCCCGTCGCCGAGCAGCCGCCGGCGAAGAAAATCGCGCTCAGCACC
GGAGGCGGAAGCAGCGTCGCAGAGTTCCTGGCCAACTGAAAGCTTTCTAG
ACCAT
BS21693.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:41:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CoRest-RF | 1773 | CG42687-PF | 1..1773 | 17..1789 | 8865 | 100 | Plus |
| CoRest-RE | 1767 | CG42687-PE | 1..1767 | 17..1789 | 8740 | 99.7 | Plus |
| CoRest-RJ | 1011 | CG42687-PJ | 31..1011 | 809..1789 | 4905 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:42:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CoRest-RF | 3296 | CG42687-RF | 385..2157 | 17..1789 | 8865 | 100 | Plus |
| CoRest-RE | 3290 | CG33525-RE | 385..2151 | 17..1789 | 8740 | 99.7 | Plus |
| CoRest-RJ | 2203 | CG42687-RJ | 84..1064 | 809..1789 | 4905 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:41:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19528894..19529601 | 998..1705 | 3540 | 100 | Plus |
| X | 23542271 | X | 19523096..19523315 | 17..236 | 1100 | 100 | Plus |
| X | 23542271 | X | 19523715..19523929 | 420..634 | 1075 | 100 | Plus |
| X | 23542271 | X | 19528633..19528823 | 807..997 | 955 | 100 | Plus |
| X | 23542271 | X | 19523989..19524163 | 634..808 | 875 | 100 | Plus |
| X | 23542271 | X | 19523493..19523629 | 283..419 | 685 | 100 | Plus |
| X | 23542271 | X | 19529673..19529757 | 1705..1789 | 425 | 100 | Plus |
| X | 23542271 | X | 19523387..19523434 | 237..284 | 240 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 07:41:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6945 | 87..315 | 160 | 53.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6779..6890 | 79..192 | 151 | 61.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6745..6916 | 93..261 | 141 | 55.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6844..7018 | 93..266 | 124 | 57 | Plus |
BS21693.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-17 10:42:00 Download gff for
BS21693.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CoRest-RF | 457..2228 | 17..1788 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:20:43 Download gff for
BS21693.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CoRest-RF | 385..2156 | 17..1788 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:15:25 Download gff for
BS21693.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CoRest-RF | 385..2156 | 17..1788 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:15:25 Download gff for
BS21693.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19523715..19523929 | 420..634 | 100 | -> | Plus |
| X | 19523990..19524163 | 635..808 | 100 | -> | Plus |
| X | 19528635..19528823 | 809..997 | 100 | -> | Plus |
| X | 19523096..19523315 | 17..236 | 100 | -> | Plus |
| X | 19523387..19523434 | 237..284 | 100 | -> | Plus |
| X | 19523495..19523629 | 285..419 | 100 | -> | Plus |
| X | 19528894..19529601 | 998..1705 | 100 | -> | Plus |
| X | 19529674..19529756 | 1706..1788 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:20:43 Download gff for
BS21693.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19417129..19417348 | 17..236 | 100 | -> | Plus |
| arm_X | 19417420..19417467 | 237..284 | 100 | -> | Plus |
| arm_X | 19417528..19417662 | 285..419 | 100 | -> | Plus |
| arm_X | 19417748..19417962 | 420..634 | 100 | -> | Plus |
| arm_X | 19418023..19418196 | 635..808 | 100 | -> | Plus |
| arm_X | 19422668..19422856 | 809..997 | 100 | -> | Plus |
| arm_X | 19422927..19423634 | 998..1705 | 100 | -> | Plus |
| arm_X | 19423707..19423789 | 1706..1788 | 100 | | Plus |
BS21693.pep Sequence
Translation from 16 to 1788
> BS21693.pep
MVLAERNTTDVVRNGRRSRGPSPNTHTTGGVTNSASLVGSGNNSGHSGNA
NANEKTTTAVPGAGTPESSDDDNSTKRNGKSKAKQSEYEEKIRVGRDYQA
VCPPLVPEAERRPEQMNERALLVWSPTKEIPDLKLEEYISVAKEKYGYNG
EQALGMLFWHKHDLERAVMDLANFTPFPDEWTIEDKVLFEQAFQFHGKSF
HRIRQMLPDKSIASLVKYYYSWKKTRHRSSAMDRQEKAIKAVVKDGSENG
SEVGSNEESDNDDKIQKNRQVMEQLDKECETINVDDVLSKPAAANTESAQ
PRISARWLPDEIQVALLAIREYGKNFPTIAKVVATKTEAHVRTFYLNNRR
RYNLDQIVKEYEAGKSEESGAEEQTEPAVDAAAAGAATASAPSAADSTSA
ASATADRKQSTENSNNGVETMQESLPKKEDPKKPELAAAVLKIGVAEAAD
AVATVASSTASGVIGAATSASKPSTSATITIIDESDTATNSSSDVVTTGL
ATSTGSSALSSTTSAPASKTQTSSEELSAQKSNPASGIAAIGAATGGGQT
ANSSGSKRDSSVLPVAEQPPAKKIALSTGGGSSVAEFLAN*
BS21693.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:20:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CoRest-PF | 590 | CG42687-PF | 1..590 | 1..590 | 2967 | 100 | Plus |
| CoRest-PE | 588 | CG33525-PE | 1..588 | 1..590 | 2945 | 99.7 | Plus |
| CoRest-PI | 824 | CG42687-PI | 498..824 | 264..590 | 1579 | 99.7 | Plus |
| CoRest-PH | 824 | CG42687-PH | 498..824 | 264..590 | 1579 | 99.7 | Plus |
| CoRest-PJ | 336 | CG42687-PJ | 11..336 | 265..590 | 1578 | 100 | Plus |
| CoRest-PI | 824 | CG42687-PI | 1..264 | 1..264 | 1389 | 100 | Plus |
