BS21705.complete Sequence
2276 bp assembled on 2011-02-14
GenBank Submission: KX803650
> BS21705.complete
GAAGTTATCAGTCGACATGTTGAAGTTGGCGCCGCAGGGCGGCAGATATT
ATAGCCAAATAAGCCGCATTTGCCAGTGGATTTTGCCGAAAATTCAGACG
CAGTCGAAGCCACCAAAACAACAACAACAACAGCAACCACAATTGAAAGA
ACAACAACAACACAGCTACGCAACTTTGGCTGCCAAGATGAAGAAGGAGA
AAAAGGAGAAGCCATCCGGCGGTGGAGATACTCGCAAGGAACTCAGTCCC
TTGCCCAAGTACATCGAGGAGCGCAATGTCTTCTGGGAGAAGTGCAAGGC
GGAATACGAGGCCGAACTGGCGGCCAAGAAGCGTGAGCCCATCAAGGTGA
CACTGCCCGATGGCAAGCAGGTGGACGCCACCTCCTGGGAGACCACTCCG
TACGAAGTGGCCCGCGGCATTAGTCAGGGTCTCGCTGACAACACCGTCAT
CTCCAAGGTGAACGGCGAGGTGTGGGATTTGGACCGTGTGCTCGAGGGAA
ACTGCACCCTGCAGCTTCTCAAGTTCGACGACCCTGAGGCGCAGGCCGTC
TTCTGGCACAGCTCTGCCCACATCATGGGTGAGGCCATGGAGCGCATCTA
TGGTGGACACCTGTGCTACGGTCCGCCCATTGAAAACGGCTTCTACTACG
ACATGCATCTGGAGGGCGAGGGTATCTCCACCAACGACTACGGCGCCATG
GAGGGTCTGGTTAAGCAAATTGTCAAGGAGAAGCAAAACTTCGAACGTCT
GGAGATGAAGAAGTCCGACCTGCTGGAGATGTTCAAATACAATGAGTTCA
AGGTGCGCATTCTCAACGAGAAGGTGACCACCGACCGCACCACTGTCTAC
AAGTGCGGTTCTTTGATCGATCTCTGCCGCGGACCTCATGTTCGTCACAC
CGGCAAGGTGAAGGCCCTGAAGATCACCAAGAACTCCTCTACCTACTGGG
AGGGTAAGGCTGACGCTGAGACACTGCAACGCGTCTACGGCATCTCGTTC
CCCGACCCGAAGCAGCTCAAGGAGTGGGAGAAACTTCAGGAGGAGGCGGC
TAAGCGTGATCACCGCAAAATCGGTCGCGAGCAGGAGCTGTTCTTCTTCC
ATGAACTTTCGCCTGGCTCATGCTTTTTCCAGCCGCGAGGAGCGCACATC
TACAACACCCTGATGGGCTTCATCAAGGCGGAATATAGAAAGCGTGGTTT
CCAAGAAGTCATTTCCCCCAACATCTACAACGCTAAGTTGTGGATGACCT
CCGGCCACTGGCAGCACTATGCCGAGAACATGTTCTCCTTCGAGGCCGAG
AAGGAGAAGTTCGCCCTCAAGCCCATGAATTGTCCAGGACATTGTCTCAT
CTTCGATAACCGCAATCGATCCTGGCGAGAGCTGCCACTGCGAATGGCCG
ACTTCGGTGTGCTTCATCGCAACGAGCTCTCCGGTGCTTTAACCGGATTA
ACTCGCGTGCGTCGCTTCCAGCAGGACGATGCGCACATCTTCTGTGCCCC
CGAGCAGATTAAAAGCGAAATGAAGGGCTGCCTGGAGTTCCTGAAGTATG
TGTATACCATTTTCGGATTCTCCTTCCAGCTGGTGCTGTCCACACGCCCG
GATAATTACCTTGGCGAGTTGGAACAGTGGAATGATGCGGAAAAGGCGCT
GGCTGAATCACTCAACGAGTTTGGAATGCCGTGGAAGGAGAACCCCGGCG
ATGGCGCCTTCTACGGACCGAAGATTGATATTACCATTATGGATGCACTG
AAGCGTGCCCATCAGTGCGCCACCATCCAGTTGGACTTCCAGCTGCCAAT
TCGTTTTAATCTCAGCTACATCGCCGACGATGGCGAGAAGAAGAGGCCGG
TGATCATCCATCGCGCTATTCTTGGCTCAGTGGAGCGGATGATTGCCATT
CTCACGGAGAACTTTGCTGGCAAGTGGCCCTTCTGGCTATCACCGCGCCA
GGTGATGGTCGTTCCAGTGGGTCCTGCCTATGATCAGTACGCCCAGTCAG
TGCGGGATCAGTTGCACGATGCTGGATTCATGAGCGAGGCGGATTGCGAT
GCCGGCGACACGATGAACAAGAAGATACGCAATGCTCAGTTGGCCCAGTT
CAACTTCATTCTGGTGGTGGGCGACAAGGAGCGCTCCTCGAATACCGTTA
ACGTGCGCACTCGGGACAACAAGGTGCACGGCGAGGTCTCCGTGGCGGAA
CTCATCACAAAGCTGCAAAAGATTCGCGACGAATTCATCGCCAACGAGGA
CAGCTTCTAAAAGCTTTCTAGACCAT
BS21705.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:28:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-thr-RD | 2244 | CG5353-PD | 1..2244 | 17..2260 | 11205 | 100 | Plus |
| Aats-thr-RA | 2244 | CG5353-PA | 1..2244 | 17..2260 | 11205 | 100 | Plus |
| Aats-thr-RC | 2073 | CG5353-PC | 1..2073 | 188..2260 | 10350 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:28:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-thr-RD | 2796 | CG5353-RD | 145..2388 | 17..2260 | 11205 | 100 | Plus |
| Aats-thr-RA | 2520 | CG5353-RA | 145..2388 | 17..2260 | 11205 | 100 | Plus |
| Aats-thr-RB | 2298 | CG5353-RB | 84..2166 | 178..2260 | 10400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:28:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12105176..12106762 | 674..2260 | 7920 | 99.9 | Plus |
| 2L | 23513712 | 2L | 12104687..12105121 | 239..673 | 2175 | 100 | Plus |
| 2L | 23513712 | 2L | 12103895..12104057 | 17..179 | 815 | 100 | Plus |
| 2L | 23513712 | 2L | 12104491..12104552 | 178..239 | 310 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:28:20 has no hits.
BS21705.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-09 09:17:38 Download gff for
BS21705.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-thr-RA | 115..2351 | 22..2258 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:54:46 Download gff for
BS21705.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-thr-RA | 150..2386 | 22..2258 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:26:14 Download gff for
BS21705.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-thr-RA | 150..2386 | 22..2258 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:26:14 Download gff for
BS21705.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12103900..12104056 | 22..178 | 100 | -> | Plus |
| 2L | 12104492..12104552 | 179..239 | 100 | -> | Plus |
| 2L | 12104688..12105121 | 240..673 | 100 | -> | Plus |
| 2L | 12105176..12106760 | 674..2258 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:54:46 Download gff for
BS21705.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12105176..12106760 | 674..2258 | 99 | | Plus |
| arm_2L | 12103900..12104056 | 22..178 | 100 | -> | Plus |
| arm_2L | 12104492..12104552 | 179..239 | 100 | -> | Plus |
| arm_2L | 12104688..12105121 | 240..673 | 100 | -> | Plus |
BS21705.pep Sequence
Translation from 16 to 2259
> BS21705.pep
MLKLAPQGGRYYSQISRICQWILPKIQTQSKPPKQQQQQQPQLKEQQQHS
YATLAAKMKKEKKEKPSGGGDTRKELSPLPKYIEERNVFWEKCKAEYEAE
LAAKKREPIKVTLPDGKQVDATSWETTPYEVARGISQGLADNTVISKVNG
EVWDLDRVLEGNCTLQLLKFDDPEAQAVFWHSSAHIMGEAMERIYGGHLC
YGPPIENGFYYDMHLEGEGISTNDYGAMEGLVKQIVKEKQNFERLEMKKS
DLLEMFKYNEFKVRILNEKVTTDRTTVYKCGSLIDLCRGPHVRHTGKVKA
LKITKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWEKLQEEAAKRDHR
KIGREQELFFFHELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGFQEVIS
PNIYNAKLWMTSGHWQHYAENMFSFEAEKEKFALKPMNCPGHCLIFDNRN
RSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKS
EMKGCLEFLKYVYTIFGFSFQLVLSTRPDNYLGELEQWNDAEKALAESLN
EFGMPWKENPGDGAFYGPKIDITIMDALKRAHQCATIQLDFQLPIRFNLS
YIADDGEKKRPVIIHRAILGSVERMIAILTENFAGKWPFWLSPRQVMVVP
VGPAYDQYAQSVRDQLHDAGFMSEADCDAGDTMNKKIRNAQLAQFNFILV
VGDKERSSNTVNVRTRDNKVHGEVSVAELITKLQKIRDEFIANEDSF*
BS21705.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:09:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-thr-PD | 747 | CG5353-PD | 1..747 | 1..747 | 3977 | 100 | Plus |
| Aats-thr-PA | 747 | CG5353-PA | 1..747 | 1..747 | 3977 | 100 | Plus |
| Aats-thr-PC | 690 | CG5353-PC | 1..690 | 58..747 | 3678 | 100 | Plus |
| Aats-thr-PB | 690 | CG5353-PB | 1..690 | 58..747 | 3678 | 100 | Plus |
