BS21715.complete Sequence
1141 bp assembled on 2011-02-01
GenBank Submission: KX803342
> BS21715.complete
GAAGTTATCAGTCGACATGTTCGGATTGGGACAACTTTTGGCGGTAGCCC
TTCTTCTCATTTTCTTGCCATCGGGCTTGAGAGGCGCAACGACACGAACA
CACTTGGACACGAAGGCCATCCGTCCGAGATTCAATGCGGATCCCGGCAG
GATTATCAATGGAACAGAGGCCTCTCTGGGCGCAACTAGGCATCAGGTGG
GCATTCGCAAGGCTCTCAACGATGGCTACTTCTTTGGAACCGGGCACCTT
TGCGGAGGATCTCTCATCCGGCCGGGATGGGTACTCACCGCCGCCCATTG
CTTTGTGGATCAGATTATTTACGACGGCACTTTCGTGCCCAAGGAGGAGT
TCATCGTGGTGATGGGTAACCTGGATCGCTACAATCGCACCAACACGCTA
ACATTCACGATCGAAGAGCGCATAATGCAGCTGGATAAGTTCGACCTTTC
CACCTACGACAAGGACATCGCCCTGCTGATGCTGAATGGTACTGTACCCA
CTGGACATCCGACCATTCGTCCAATTGCCCTCAATCGGTTTGCCATACCG
GAGGGCGTCGTCTGCCAGGTGACGGGCTGGGGCAATACGGAGGATGGCTA
TGTCTCCGACATCCTGATGACCGTCGATGTGCCGATGATCAGCGAGGAGC
ATTGCATCAATGACAGCGACCTGGGCCACCTGATTCAGCCGGGAATGATA
TGTGCCGGTTATTTGGAGGTGGGAGAAAAGGATGCCTGCGCCGGCGATTC
CGGCGGACCATTGGTGTGCCAAAGTGAATTGGCCGGCGTGGTTTCCTGGG
GCATTCAATGTGCCCTGCCCAGATTACCGGGTGTGTACACAGAGGTGTCC
TACTACTACGACTGGATACTACAGAATATGGGCGAGAATGGTGAAGGAAG
TGGTGAAGAAAGTGGTGAGGGAAGTGGTGAGGGAAGTGGTGAGGGAAGTG
GTGAAGGAAGTGGTGAAGGTAGTGGTGATGACGGAAGTGGTGACGACGAA
GATGGAAGTGGTGATGGTGGTGGTGCCATGGCCGCCGTGGCCGGAAGTCT
GACTCTTCTTCTGCCCGGAATACTCGCTCTGAGACTAATGGCTACGCAGT
TCTAAAAGCTTTCTAGACCATTCGTTTGGCGCCCAAAAAGG
BS21715.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:43:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6048-RA | 1089 | CG6048-PA | 1..1089 | 17..1105 | 5445 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:43:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6048-RA | 1158 | CG6048-RA | 34..1124 | 17..1107 | 5455 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:43:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5953215..5954012 | 310..1107 | 3990 | 100 | Plus |
| X | 23542271 | X | 5952730..5952957 | 82..309 | 1140 | 100 | Plus |
| X | 23542271 | X | 5952598..5952665 | 17..84 | 340 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:43:46 has no hits.
BS21715.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 15:39:23 Download gff for
BS21715.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6048-RA | 39..1124 | 22..1107 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:34:54 Download gff for
BS21715.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6048-RA | 39..1124 | 22..1107 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:40:48 Download gff for
BS21715.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6048-RA | 39..1124 | 22..1107 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:40:48 Download gff for
BS21715.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5952603..5952664 | 22..83 | 100 | -> | Plus |
| X | 5952732..5952957 | 84..309 | 100 | -> | Plus |
| X | 5953215..5954012 | 310..1107 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:34:54 Download gff for
BS21715.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5846636..5846697 | 22..83 | 100 | -> | Plus |
| arm_X | 5846765..5846990 | 84..309 | 100 | -> | Plus |
| arm_X | 5847248..5848045 | 310..1107 | 100 | | Plus |
BS21715.pep Sequence
Translation from 16 to 1104
> BS21715.pep
MFGLGQLLAVALLLIFLPSGLRGATTRTHLDTKAIRPRFNADPGRIINGT
EASLGATRHQVGIRKALNDGYFFGTGHLCGGSLIRPGWVLTAAHCFVDQI
IYDGTFVPKEEFIVVMGNLDRYNRTNTLTFTIEERIMQLDKFDLSTYDKD
IALLMLNGTVPTGHPTIRPIALNRFAIPEGVVCQVTGWGNTEDGYVSDIL
MTVDVPMISEEHCINDSDLGHLIQPGMICAGYLEVGEKDACAGDSGGPLV
CQSELAGVVSWGIQCALPRLPGVYTEVSYYYDWILQNMGENGEGSGEESG
EGSGEGSGEGSGEGSGEGSGDDGSGDDEDGSGDGGGAMAAVAGSLTLLLP
GILALRLMATQF*
BS21715.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:58:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6048-PA | 362 | CG6048-PA | 1..362 | 1..362 | 1914 | 100 | Plus |
| CG14780-PA | 302 | CG14780-PA | 32..270 | 45..284 | 459 | 43.3 | Plus |
| CG6041-PA | 308 | CG6041-PA | 7..271 | 7..286 | 426 | 36.2 | Plus |
| CG32755-PA | 315 | CG32755-PA | 37..271 | 45..284 | 394 | 37.1 | Plus |
| zetaTry-PA | 280 | CG12387-PA | 9..273 | 7..284 | 381 | 35.3 | Plus |
