BS21724.complete Sequence
935 bp assembled on 2011-02-01
GenBank Submission: KX804119
> BS21724.complete
GAAGTTATCAGTCGACATGATCAGCCCGGTAATAACTCGACAAATGGTGC
AAATCCTGCCAAGTGTTATGGTCGGTAGGATAACACTTCCCGATATTATT
GAGGATGCAATCAAGCCCCCAACGGAAGATATTAATTTCGAAGAAAAATC
GAATGAGAATGAGGTGGAAGATAATACAGAGAAATCGGAAGCGGTTTCTG
AATCCGAAAAAGAGGTAATTGAGGTATCTGAGGAGCCGAAGGAAGAAGAG
GTAAAGTACGCTTGGAATGCACCCTGCATGATGGTCATCTTCGAGGATGG
CGATGTCAATTGTGCCCTGCATCACCTGGTCGAATCTCTACAGGATCCCT
TTGCCTTAGATGCGGTTGCCGTGATCTTGGTACAAGAAGCTTTAGCCGAA
GAAATCGAAAACCGAGTAAAAATTCTGATGAAACCCTTGGATGCCAGGGT
GGCCAATCATCCGTGCTACAAGCGCACTCTGATGAAGATTGACGAACTTA
GGCCGAAAACTATAATAGGTCCTTCAGATCGTGTCTTACCCGATGCCACG
CCCATAATGGTGCGGGACATACCACACAAATTTCTGGGCGATGGACCCAC
TGGCATTATAACCATGCATATTTTTCGCACCCCTTTCGAAGCCACTCAGA
TATATAGAAAGGAATATCCCCTACCAATCGCATCGGTTAGTATATGGAAT
GAGCGGGTTTCGAGTGTTTACGATGTAATTGGCATGATGAATCTACTCGA
TACCTTTAAGATCAACTGTTTCACGGTCGATATGGAGCCCATTAAGCGGG
CATTCGAGCTAAGGAAGTATAGTGCTTGTATACATCGTGGTTATCACTAT
GAAACCCTGCCCATAAATGGCGAGAGAAAGATTATCATATATCCAGTTGG
AACTATATTTGGCAATTGAAAGCTTTCTAGACCAT
BS21724.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:47:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12516-RB | 903 | CG12516-PB | 1..903 | 17..919 | 4515 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12516-RB | 975 | CG12516-RB | 39..942 | 17..920 | 4520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 28303664..28304567 | 920..17 | 4520 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:47:56 has no hits.
BS21724.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:31:57 Download gff for
BS21724.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12516-RB | 39..940 | 17..918 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:34:24 Download gff for
BS21724.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12516-RB | 39..940 | 17..918 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:09:56 Download gff for
BS21724.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12516-RB | 39..940 | 17..918 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:09:56 Download gff for
BS21724.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 28303666..28304567 | 17..918 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:34:24 Download gff for
BS21724.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 24129388..24130289 | 17..918 | 100 | | Minus |
BS21724.pep Sequence
Translation from 16 to 918
> BS21724.pep
MISPVITRQMVQILPSVMVGRITLPDIIEDAIKPPTEDINFEEKSNENEV
EDNTEKSEAVSESEKEVIEVSEEPKEEEVKYAWNAPCMMVIFEDGDVNCA
LHHLVESLQDPFALDAVAVILVQEALAEEIENRVKILMKPLDARVANHPC
YKRTLMKIDELRPKTIIGPSDRVLPDATPIMVRDIPHKFLGDGPTGIITM
HIFRTPFEATQIYRKEYPLPIASVSIWNERVSSVYDVIGMMNLLDTFKIN
CFTVDMEPIKRAFELRKYSACIHRGYHYETLPINGERKIIIYPVGTIFGN
*
BS21724.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:05:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12516-PB | 300 | CG12516-PB | 1..300 | 1..300 | 1558 | 100 | Plus |
CG2336-PA | 322 | CG2336-PA | 45..311 | 30..298 | 559 | 41.3 | Plus |
CG15717-PE | 252 | CG15717-PE | 22..252 | 73..300 | 500 | 41.3 | Plus |
CG15717-PC | 252 | CG15717-PC | 22..252 | 73..300 | 500 | 41.3 | Plus |
CG15717-PA | 252 | CG15717-PA | 22..252 | 73..300 | 500 | 41.3 | Plus |