Clone BS21725 Report

Search the DGRC for BS21725

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:217
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG17982-RA
Protein status:BS21725.pep: full length peptide match
Sequenced Size:938

Clone Sequence Records

BS21725.complete Sequence

938 bp assembled on 2011-02-01

GenBank Submission: KX800700

> BS21725.complete
GAAGTTATCAGTCGACATGGCAAGCAATCCGAAGAAGTCCCTCCACCAGG
CGATCCAGGCCGAGTTTGGTCTCCAGCCCACCAGCGATTTGTCCAAATTG
AGCAGTATAAGTGGCACGAGCCCAGAAGCGATGCCAAAATTCACAATTCC
GCAGCTCAAAATTCCACAGCTTAGAATTCCACAATTGCAGCTGCAGACGA
ATGCGGATGCCGCTGCCGAGCAGGAATACCGCCGAGAGGCGGAGGCACAC
AATCAAATGCTACTCAATGAGATCCAGTTGAGGCAACGGCAGCGATCGGA
GGGCGAAAACAAGCCGCAATCAATGGGATTTGTGTTACCCCAACTGGTCG
CGATGCCCAAGGAGCCCCTGAACATACCCCTGCTGACAAGGTTGGAGAGC
GGCATGAAGAAGCTGGATATAGGCGATGGGACAAAGGTGAATACAGCCAC
GTCAGCACCCCCACTCATTGACCTCACGTCCACGATTATCGCCAGGCATA
AAGGCGCACCGCCCAAGGAGCTGGCCAGCAAGGCGCGCCAGTTGACCAAT
TGTGAGCCTTTTGCCATACCCTTCATTGCCTGCGATCGCGGAAGAAGGAG
CACGACCGGTGTAACTCTCTTGGCCAGCAAAAGATCCATCAACTACGACG
AGGACGTGCTGGCCGATCGGTCACCAGCGAATAGCGACTACCGGGAGCAA
CCGGGACCCATTGGGCTCATGCTGGACGAAATGGTGGGCTATCCGGAGCC
GAGAAAGCCCCGTCTAGTGTACGCCGTCACTCCGCTGGAACGGCAGCACC
TGCGAATGTGCCAGTATAAGGATTACGGCATCCAGGTGAAGAGATTCCGC
TTTGATACTCCCTCGCCGGATGAGCTCGTCAAGCAGGCGCTGCAGAAGTC
CTGGCGCTTCTCCCGCACTTGAAAGCTTTCTAGACCAT

BS21725.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:44:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG17982-RB 906 CG17982-PB 1..906 17..922 4530 100 Plus
CG17982-RA 906 CG17982-PA 1..906 17..922 4530 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:44:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG17982-RB 1286 CG17982-RB 315..1220 17..922 4530 100 Plus
CG17982-RA 1056 CG17982-RA 85..990 17..922 4530 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:44:14
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8142616..8143521 922..17 4530 100 Minus
Blast to na_te.dros performed on 2014-11-26 21:44:15 has no hits.

BS21725.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 15:39:27 Download gff for BS21725.complete
Subject Subject Range Query Range Percent Splice Strand
CG17982-RA 85..989 17..921 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:35:08 Download gff for BS21725.complete
Subject Subject Range Query Range Percent Splice Strand
CG17982-RA 85..989 17..921 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:41:01 Download gff for BS21725.complete
Subject Subject Range Query Range Percent Splice Strand
CG17982-RA 85..989 17..921 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:41:01 Download gff for BS21725.complete
Subject Subject Range Query Range Percent Splice Strand
X 8142617..8143521 17..921 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:35:08 Download gff for BS21725.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 8036650..8037554 17..921 100   Minus

BS21725.pep Sequence

Translation from 16 to 921

> BS21725.pep
MASNPKKSLHQAIQAEFGLQPTSDLSKLSSISGTSPEAMPKFTIPQLKIP
QLRIPQLQLQTNADAAAEQEYRREAEAHNQMLLNEIQLRQRQRSEGENKP
QSMGFVLPQLVAMPKEPLNIPLLTRLESGMKKLDIGDGTKVNTATSAPPL
IDLTSTIIARHKGAPPKELASKARQLTNCEPFAIPFIACDRGRRSTTGVT
LLASKRSINYDEDVLADRSPANSDYREQPGPIGLMLDEMVGYPEPRKPRL
VYAVTPLERQHLRMCQYKDYGIQVKRFRFDTPSPDELVKQALQKSWRFSR
T*

BS21725.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:58:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG17982-PB 301 CG17982-PB 1..301 1..301 1545 100 Plus
CG17982-PA 301 CG17982-PA 1..301 1..301 1545 100 Plus