BS21726.complete Sequence
829 bp assembled on 2011-02-01
GenBank Submission: KX802175
> BS21726.complete
GAAGTTATCAGTCGACATGGCCCTGGTGGACTATGGTGGCAGCAGCTCCT
CCGCCTCCGAGGATGAGGACTGCACCGAAAACATTCAAACTCCCGCGTTG
ATCACCTTGAAAAGACCGGCCCTACCCAAAGCAGCCACCCTGCTGGGCCC
CAAGAAGCCCAAGCCCGAGGAGTTCGTCGAGGATGTGGTGGATGATCCCG
CGGAACATGGCGGCCGCATGCGTAGTTTCAAGCATGAACGGGGAAACTGG
GCCACTTACGTCTATGTGCCGGCAACAGCATGTGTTGACCAGCTGGAGGA
GTTCCAAACGGAGGCCATTGCTCGTCTGGAGCCACACTTGGAACTGCAGC
CGAACGAGTCGCTCCATCTGAGCCTGAGTCGAACAGTGGTGCTGCAGTAC
CATCAGATCGATGAATTCTCCCGATCCTTGCAAAGCGCCCTCAACAGCTC
TGCGGGATTCGCCGCCACTTTGCAGGGGCTGCGGATCTACACGAATGAGG
AGCGAACCAGGACCTTCATTGCTGCGCCCCTGGACGCTGCATTTGTGGAG
AAGATGACTGCCATTCTGCAGCCCATCGACCAAGTGATGCTCGACTACCG
GCTGCAACAGTTCTATGATCCGGCCTCGTTCCACGTCAGCCTTCTTTGGT
GCGTTGGCGACCAGGAGACACTGCTTAACGAAAAGCTCACGGAGTTAAAA
GAGCTCCTTGATGATCAGGACAAACTCTGCCTGGCGGTCAATGAGGTGCA
CCTAAAGTGCGGCAACAAGGATTTTACCTACTCGTTGAAATAGAAGCTTT
CTAGACCATTCGTTTGGCGCGCTAAACGG
BS21726.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:44:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16790-RA | 777 | CG16790-PA | 1..777 | 17..793 | 3885 | 100 | Plus |
CG16790-RB | 159 | CG16790-PB | 1..159 | 17..195 | 560 | 88.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:44:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16790-RA | 1028 | CG16790-RA | 75..851 | 17..793 | 3885 | 100 | Plus |
CG16790-RB | 1008 | CG16790-RB | 75..831 | 17..793 | 3550 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:44:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 9569649..9569994 | 456..111 | 1730 | 100 | Minus |
3R | 32079331 | 3R | 9569251..9569588 | 793..456 | 1690 | 100 | Minus |
3R | 32079331 | 3R | 9570043..9570140 | 114..17 | 490 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 21:44:40 has no hits.
BS21726.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 15:39:28 Download gff for
BS21726.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16790-RA | 75..857 | 17..799 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:35:21 Download gff for
BS21726.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16790-RA | 75..857 | 17..799 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:41:11 Download gff for
BS21726.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16790-RA | 75..857 | 17..799 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:41:11 Download gff for
BS21726.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 9569245..9569587 | 457..799 | 99 | <- | Minus |
3R | 9569649..9569990 | 115..456 | 100 | <- | Minus |
3R | 9570043..9570140 | 17..114 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:35:21 Download gff for
BS21726.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 5394967..5395309 | 457..799 | 99 | <- | Minus |
arm_3R | 5395371..5395712 | 115..456 | 100 | <- | Minus |
arm_3R | 5395765..5395862 | 17..114 | 100 | | Minus |
BS21726.pep Sequence
Translation from 16 to 792
> BS21726.pep
MALVDYGGSSSSASEDEDCTENIQTPALITLKRPALPKAATLLGPKKPKP
EEFVEDVVDDPAEHGGRMRSFKHERGNWATYVYVPATACVDQLEEFQTEA
IARLEPHLELQPNESLHLSLSRTVVLQYHQIDEFSRSLQSALNSSAGFAA
TLQGLRIYTNEERTRTFIAAPLDAAFVEKMTAILQPIDQVMLDYRLQQFY
DPASFHVSLLWCVGDQETLLNEKLTELKELLDDQDKLCLAVNEVHLKCGN
KDFTYSLK*
BS21726.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:58:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16790-PA | 258 | CG16790-PA | 1..258 | 1..258 | 1333 | 100 | Plus |
CG16790-PB | 52 | CG16790-PB | 1..48 | 1..47 | 170 | 77.1 | Plus |