BS21727.complete Sequence
1172 bp assembled on 2011-02-01
GenBank Submission: KX806217
> BS21727.complete
GAAGTTATCAGTCGACATGTTGGCCGCCCGCAGATTACTACGATCACCGC
GGATTACCGGTGCCCTAAGCTGGTCCCGCTGGAGCAGCGATGCCGCGAAG
GCCACAACAGAAACCTCCGCCCTTTTGCAGAACGCGGAGAAGCGGCAGCA
ACTGCTCAACGAGCTTTCTGAGCCGCTGGAACAGAAAGGCCGGCCCGCCA
TCGATCCCAAGGAAACAAGTGTGATGCTCTTTCCCGGTCAGGGCACCCAG
TACGTGGGCATGGCCAAAGACCTGCTCCGGTTCCCGGGCGCCCGTCGCAT
CTTCGAGCTGGCCAACGAGGTGCTGAAATACGATCTGCTCAAGATCTGCC
TGGAGGGACCACGTGAGAAACTGAATCGCACGGAGCACGCTCAGCTGGCT
GTGATGGTATCCTCGCTGGCAGCACTGGAGCAGTTGCGTGAGGAGCGACC
CAAGGCCATTGAAACGTGTGTAGCTGCCGCAGGCTTTAGTTTGGGCGAGA
TTACCGCATTGGTGTACGCGGATGCCCTGCCTTTCGACAAGGCATTGCGA
TTGGTGCAGGTGCGGGCCACCGCCATGCAGGCGGCATGTGACCAGGCAGC
CGGAGCCATGGCGATGACTCTCTACGGACCGGATACCAATCTGGGAGAGG
CCTGCGCTCGCGCGCAGCAATGGTGTCTGGACAAAGGAGTGGAGTCGCCC
TACTGTGGCATCGCCAACTACATGTATCCGCACTGCAAGGTAGTGGCCGG
CAACGTAGAGGCCCTGGAGTTCCTGGAACAAAATGCCAAGTCCTTCAAAA
TCCGGCGGATGAAGAGATTGGCTGTCAGTGGCGCCTTTCACACTCCTCTA
ATGCAAAGCGCCGTGGAGCCATTTACCAAAGCCCTGAAAACGGTGCGACT
TCAGGACCCCGTCATTAGAGTGTACTCCAATGTGGATGGCAAACCCTATC
GCCATGCCAAGCACATCCTAACGCAGCTGCCCAAGCAAATCGTGAGGCCC
GTCAAGTGGGAGCAGACTCTCCACGAGATGTACGAGCGCAAGCAGGGCGT
CGACTTTCCACGCACCTTCGAATGCGGTCCTGGCAAAGGCCTGGTCCAGG
TCCTGGAAAAAGTAAATGCCAAGGCCGCTCAATCCAGCTTTAATGTTATA
GCCTAAAAGCTTTCTAGACCAT
BS21727.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:44:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
beg-RA | 1140 | CG7842-PA | 1..1140 | 17..1156 | 5670 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:44:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
beg-RA | 1198 | CG7842-RA | 32..1171 | 17..1156 | 5670 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:44:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 17035699..17036838 | 17..1156 | 5670 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:44:54 has no hits.
BS21727.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 15:39:29 Download gff for
BS21727.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
beg-RA | 31..1163 | 22..1154 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:35:30 Download gff for
BS21727.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
beg-RA | 37..1169 | 22..1154 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:41:18 Download gff for
BS21727.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
beg-RA | 37..1169 | 22..1154 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:41:18 Download gff for
BS21727.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 17035704..17036836 | 22..1154 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:35:30 Download gff for
BS21727.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 17028804..17029936 | 22..1154 | 99 | | Plus |
BS21727.pep Sequence
Translation from 16 to 1155
> BS21727.pep
MLAARRLLRSPRITGALSWSRWSSDAAKATTETSALLQNAEKRQQLLNEL
SEPLEQKGRPAIDPKETSVMLFPGQGTQYVGMAKDLLRFPGARRIFELAN
EVLKYDLLKICLEGPREKLNRTEHAQLAVMVSSLAALEQLREERPKAIET
CVAAAGFSLGEITALVYADALPFDKALRLVQVRATAMQAACDQAAGAMAM
TLYGPDTNLGEACARAQQWCLDKGVESPYCGIANYMYPHCKVVAGNVEAL
EFLEQNAKSFKIRRMKRLAVSGAFHTPLMQSAVEPFTKALKTVRLQDPVI
RVYSNVDGKPYRHAKHILTQLPKQIVRPVKWEQTLHEMYERKQGVDFPRT
FECGPGKGLVQVLEKVNAKAAQSSFNVIA*
BS21727.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:58:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
beg-PA | 379 | CG7842-PA | 1..379 | 1..379 | 1939 | 100 | Plus |