Clone BS21727 Report

Search the DGRC for BS21727

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:217
Well:27
Vector:pDNR-Dual
Associated Gene/Transcriptbeg-RA
Protein status:BS21727.pep: gold
Sequenced Size:1172

Clone Sequence Records

BS21727.complete Sequence

1172 bp assembled on 2011-02-01

GenBank Submission: KX806217

> BS21727.complete
GAAGTTATCAGTCGACATGTTGGCCGCCCGCAGATTACTACGATCACCGC
GGATTACCGGTGCCCTAAGCTGGTCCCGCTGGAGCAGCGATGCCGCGAAG
GCCACAACAGAAACCTCCGCCCTTTTGCAGAACGCGGAGAAGCGGCAGCA
ACTGCTCAACGAGCTTTCTGAGCCGCTGGAACAGAAAGGCCGGCCCGCCA
TCGATCCCAAGGAAACAAGTGTGATGCTCTTTCCCGGTCAGGGCACCCAG
TACGTGGGCATGGCCAAAGACCTGCTCCGGTTCCCGGGCGCCCGTCGCAT
CTTCGAGCTGGCCAACGAGGTGCTGAAATACGATCTGCTCAAGATCTGCC
TGGAGGGACCACGTGAGAAACTGAATCGCACGGAGCACGCTCAGCTGGCT
GTGATGGTATCCTCGCTGGCAGCACTGGAGCAGTTGCGTGAGGAGCGACC
CAAGGCCATTGAAACGTGTGTAGCTGCCGCAGGCTTTAGTTTGGGCGAGA
TTACCGCATTGGTGTACGCGGATGCCCTGCCTTTCGACAAGGCATTGCGA
TTGGTGCAGGTGCGGGCCACCGCCATGCAGGCGGCATGTGACCAGGCAGC
CGGAGCCATGGCGATGACTCTCTACGGACCGGATACCAATCTGGGAGAGG
CCTGCGCTCGCGCGCAGCAATGGTGTCTGGACAAAGGAGTGGAGTCGCCC
TACTGTGGCATCGCCAACTACATGTATCCGCACTGCAAGGTAGTGGCCGG
CAACGTAGAGGCCCTGGAGTTCCTGGAACAAAATGCCAAGTCCTTCAAAA
TCCGGCGGATGAAGAGATTGGCTGTCAGTGGCGCCTTTCACACTCCTCTA
ATGCAAAGCGCCGTGGAGCCATTTACCAAAGCCCTGAAAACGGTGCGACT
TCAGGACCCCGTCATTAGAGTGTACTCCAATGTGGATGGCAAACCCTATC
GCCATGCCAAGCACATCCTAACGCAGCTGCCCAAGCAAATCGTGAGGCCC
GTCAAGTGGGAGCAGACTCTCCACGAGATGTACGAGCGCAAGCAGGGCGT
CGACTTTCCACGCACCTTCGAATGCGGTCCTGGCAAAGGCCTGGTCCAGG
TCCTGGAAAAAGTAAATGCCAAGGCCGCTCAATCCAGCTTTAATGTTATA
GCCTAAAAGCTTTCTAGACCAT

BS21727.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:44:55
Subject Length Description Subject Range Query Range Score Percent Strand
beg-RA 1140 CG7842-PA 1..1140 17..1156 5670 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:44:57
Subject Length Description Subject Range Query Range Score Percent Strand
beg-RA 1198 CG7842-RA 32..1171 17..1156 5670 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:44:53
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17035699..17036838 17..1156 5670 99.8 Plus
Blast to na_te.dros performed on 2014-11-26 21:44:54 has no hits.

BS21727.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 15:39:29 Download gff for BS21727.complete
Subject Subject Range Query Range Percent Splice Strand
beg-RA 31..1163 22..1154 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:35:30 Download gff for BS21727.complete
Subject Subject Range Query Range Percent Splice Strand
beg-RA 37..1169 22..1154 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:41:18 Download gff for BS21727.complete
Subject Subject Range Query Range Percent Splice Strand
beg-RA 37..1169 22..1154 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:41:18 Download gff for BS21727.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17035704..17036836 22..1154 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:35:30 Download gff for BS21727.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17028804..17029936 22..1154 99   Plus

BS21727.pep Sequence

Translation from 16 to 1155

> BS21727.pep
MLAARRLLRSPRITGALSWSRWSSDAAKATTETSALLQNAEKRQQLLNEL
SEPLEQKGRPAIDPKETSVMLFPGQGTQYVGMAKDLLRFPGARRIFELAN
EVLKYDLLKICLEGPREKLNRTEHAQLAVMVSSLAALEQLREERPKAIET
CVAAAGFSLGEITALVYADALPFDKALRLVQVRATAMQAACDQAAGAMAM
TLYGPDTNLGEACARAQQWCLDKGVESPYCGIANYMYPHCKVVAGNVEAL
EFLEQNAKSFKIRRMKRLAVSGAFHTPLMQSAVEPFTKALKTVRLQDPVI
RVYSNVDGKPYRHAKHILTQLPKQIVRPVKWEQTLHEMYERKQGVDFPRT
FECGPGKGLVQVLEKVNAKAAQSSFNVIA*

BS21727.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:58:50
Subject Length Description Subject Range Query Range Score Percent Strand
beg-PA 379 CG7842-PA 1..379 1..379 1939 100 Plus