BS21731.complete Sequence
861 bp assembled on 2011-02-01
GenBank Submission: KX801022
> BS21731.complete
GAAGTTATCAGTCGACATGATAAGTCGCCTGACCCTTTTGGCACTGGTTG
CCCTGCTTGGAAGCTGTAGCGCTGCTGATGGCGATGTCAATGTCTGCTCC
AATGTGGTCAACAATCTCTTTGTTCCCCAGGTGGGCAACTGTAGCAAGTA
CTTCCTGTGCATGAATGAGATAGCTGTACCCCGTGAATGCCCCACGGACT
ACTACTTCGATGCGAGGGATCAGGAGTGTGTTCCCCTGATGGAGGTCGAG
TGTATTGGATCCTGTAAGAACCGTGGTTTGTCATCGTTCTGTTACGATCG
CACGTGCACCAAGTACGTTCTCTGCTTCGACGGCACTCCGGTGATCCGTC
AGTGCTCCGATGGACTGCAGTACAACGCCCTGACCGATCGCTGTGACTAT
CCGCAGTATGTCGACTGCGTGGACAATCTGTGCAGCCGGAATAATAATCC
GGATGACATCGTTTTCATACCCAGCAAGGCTCGCTGTGACAAGTACTACA
TTTGCATGGATGGTCTTCCTCAAGTCCAGAACTGCACAAGTGGCCTGCAG
TACAATCCAAGCACTCAGAGCTGCGATTTCCCCTCGAAAGTCAACTGCAC
GGTGGAGAGCCTTCAACGGAATATCCTGCCCTTTGCCCGAGCTCCGCCAC
GTCTCGCCGACATTGAGTGTCCATCGGAGGGCGCCCACTTTATAGCCCAC
CAGAAGCGTCAGGATGCGTACTACTACTGCCTGAATGGACGTGGAGTCAC
CTTGGACTGCACACCCGGCCTGGTGTTCGATGCCAAGCGCGAGGAGTGCC
GTGAACCACACCTCGTGGGCTTCTAGAAGCTTTCTAGACCATTCGTTTGG
CGCGCTAAAGG
BS21731.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:48:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10725-RB | 810 | CG10725-PB | 1..810 | 17..826 | 4035 | 99.9 | Plus |
| CG10154-RB | 951 | CG10154-PB | 412..551 | 287..426 | 190 | 75.7 | Plus |
| CG10154-RA | 951 | CG10154-PA | 412..551 | 287..426 | 190 | 75.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:48:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10725-RB | 876 | CG10725-RB | 33..842 | 17..826 | 4035 | 99.9 | Plus |
| CG10154-RB | 1023 | CG10154-RB | 452..591 | 287..426 | 190 | 75.7 | Plus |
| CG10154-RA | 1165 | CG10154-RA | 452..591 | 287..426 | 190 | 75.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:48:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13438250..13438689 | 165..604 | 2200 | 100 | Plus |
| 3L | 28110227 | 3L | 13438750..13438975 | 601..826 | 1115 | 99.6 | Plus |
| 3L | 28110227 | 3L | 13438045..13438191 | 18..164 | 735 | 100 | Plus |
| 3L | 28110227 | 3L | 13436396..13436535 | 426..287 | 190 | 75.7 | Minus |
Blast to na_te.dros performed on 2014-11-26 21:48:27 has no hits.
BS21731.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 15:39:32 Download gff for
BS21731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10725-RB | 31..845 | 17..831 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:37:16 Download gff for
BS21731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10725-RB | 33..847 | 17..831 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:42:45 Download gff for
BS21731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10725-RB | 33..847 | 17..831 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:42:45 Download gff for
BS21731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13438043..13438191 | 17..164 | 99 | -> | Plus |
| 3L | 13438250..13438686 | 165..601 | 100 | -> | Plus |
| 3L | 13438751..13438974 | 602..825 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:37:16 Download gff for
BS21731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13431143..13431291 | 17..164 | 99 | -> | Plus |
| arm_3L | 13431350..13431786 | 165..601 | 100 | -> | Plus |
| arm_3L | 13431851..13432074 | 602..825 | 99 | -> | Plus |
BS21731.pep Sequence
Translation from 16 to 825
> BS21731.pep
MISRLTLLALVALLGSCSAADGDVNVCSNVVNNLFVPQVGNCSKYFLCMN
EIAVPRECPTDYYFDARDQECVPLMEVECIGSCKNRGLSSFCYDRTCTKY
VLCFDGTPVIRQCSDGLQYNALTDRCDYPQYVDCVDNLCSRNNNPDDIVF
IPSKARCDKYYICMDGLPQVQNCTSGLQYNPSTQSCDFPSKVNCTVESLQ
RNILPFARAPPRLADIECPSEGAHFIAHQKRQDAYYYCLNGRGVTLDCTP
GLVFDAKREECREPHLVGF*
BS21731.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:59:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10725-PB | 269 | CG10725-PB | 1..269 | 1..269 | 1489 | 100 | Plus |
| CG10154-PB | 316 | CG10154-PB | 55..315 | 24..268 | 774 | 52.9 | Plus |
| CG10154-PA | 316 | CG10154-PA | 55..315 | 24..268 | 774 | 52.9 | Plus |
| CG10140-PA | 297 | CG10140-PA | 50..296 | 22..268 | 682 | 45.3 | Plus |
| CG7290-PB | 419 | CG7290-PB | 5..271 | 4..261 | 233 | 26.3 | Plus |
