BS21737.complete Sequence
773 bp assembled on 2011-02-01
GenBank Submission: KX806473
> BS21737.complete
GAAGTTATCAGTCGACATGACCACTTGTTGCCTTGGAAACGCTGAGGATA
AACGTAAACAAAAGATGATGGACTGGGCCGAAGAACTCAAGATGACCATA
AGAAAGACGACGGCCAGGAAGGGTCGGCGCTCCAAGAGTCGCGATGTTCT
GAAGGAGGAGGATGTCCAGGCGGCTGGGGGCTCCAAGGACATTTCCATCG
ACATTACGCTGAATGTCCAGGCGGGCACCCCACCGACCACCTCGGACACG
GCCACCTCGTCCACATACAACAATGAATTCGAGTCACATCGACCACCCAT
TCGTCGCATTTCAGGTGGCTGGGCGGATTCTGGACTCAAAGGATTAAAGT
CTAAGAAAAACTCCTTTGATGATGAGCGCTTTAAACAAACAAAGTCGGCT
ACAAATTCCATACCAACGGATGACATTCCCGTCATCCCAGACATGGATGA
TGTCAAGGACGAAATCATGCTCAATGAGATTGTAGAACCGCCAACTATTG
GCACCTCACGATCTGCTGTTTTGAAGGAGGCCAATTCCGATTTGCTTTCC
CAGTACGCCTTTTCAGCTGTGGATGGCTTTGATCTCTCAATCCTCACCGA
TTGCCTGGTTCCACAGGAGAGCCTCAACGAGAAGGACGATCTCTGGCAGT
GGGACAAGCTGTTCACCGAGGTCACGGCTGAAATCCATTCGGATAAAGTG
CCCAATATGGGCATGAAAATAGGACCCGATGTGATTCCACCCACACAATA
TACTTAGAAGCTTTCTAGACCAT
BS21737.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:48:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5780-RB | 690 | CG5780-PB | 1..690 | 68..757 | 3435 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:48:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5780-RB | 881 | CG5780-RB | 25..766 | 16..757 | 3695 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:48:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 12693987..12694248 | 757..496 | 1310 | 100 | Minus |
2L | 23513712 | 2L | 12694572..12694817 | 350..105 | 1230 | 100 | Minus |
2L | 23513712 | 2L | 12694304..12694426 | 495..373 | 615 | 100 | Minus |
2L | 23513712 | 2L | 12694874..12694964 | 106..16 | 455 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 21:48:39 has no hits.
BS21737.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 15:39:32 Download gff for
BS21737.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5780-RB | 20..760 | 17..757 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:37:22 Download gff for
BS21737.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5780-RB | 26..766 | 17..757 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:42:51 Download gff for
BS21737.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5780-RB | 26..766 | 17..757 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:42:51 Download gff for
BS21737.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 12694494..12694517 | 349..372 | 95 | <- | Minus |
2L | 12693987..12694248 | 496..757 | 100 | <- | Minus |
2L | 12694304..12694426 | 373..495 | 100 | <- | Minus |
2L | 12694574..12694815 | 107..348 | 100 | <- | Minus |
2L | 12694874..12694963 | 17..106 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:37:22 Download gff for
BS21737.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 12694304..12694426 | 373..495 | 100 | <- | Minus |
arm_2L | 12694494..12694517 | 349..372 | 95 | <- | Minus |
arm_2L | 12693987..12694248 | 496..757 | 100 | <- | Minus |
arm_2L | 12694574..12694815 | 107..348 | 100 | <- | Minus |
arm_2L | 12694874..12694963 | 17..106 | 100 | | Minus |
BS21737.pep Sequence
Translation from 16 to 756
> BS21737.pep
MTTCCLGNAEDKRKQKMMDWAEELKMTIRKTTARKGRRSKSRDVLKEEDV
QAAGGSKDISIDITLNVQAGTPPTTSDTATSSTYNNEFESHRPPIRRISG
GWADSGLKGLKSKKNSFDDERFKQTKSATNSIPTDDIPVIPDMDDVKDEI
MLNEIVEPPTIGTSRSAVLKEANSDLLSQYAFSAVDGFDLSILTDCLVPQ
ESLNEKDDLWQWDKLFTEVTAEIHSDKVPNMGMKIGPDVIPPTQYT*
BS21737.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:59:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5780-PB | 229 | CG5780-PB | 1..229 | 18..246 | 1186 | 100 | Plus |