BS21738.complete Sequence
941 bp assembled on 2011-02-01
GenBank Submission: KX802687
> BS21738.complete
GAAGTTATCAGTCGACATGGAGCTGGAGATTTTGAACGCGAAGAACAGCA
AGCCGTACGGCAAGGTGAAGGTGCCCTCCGGCGCCACGCCCATCGGCGAT
CTGCGCGCCCTAATCCACAAGACCCTGAAGCAGACCCCACACGCGAATCG
CCAGTCGCTGCGCCTGGAACTGAAGGGCAAAAGCCTGAAGGATACGGACA
CATTGGAATCCCTGTCGCTGCGTTCCGGCGACAAGATCTATGTGAAGGAT
CTGGGTCCCCAGATTGGCTGGAAGACCGTTTTCCTGGCCGAGTACGCCGG
CCCACTGATTGTATACTTGATTTTCTACTTCCGACCGGAGTTGGTGTACG
GCAAAGCTGCCAGTCTGCCGATTTCCCTAACCACCCACATTGCCGCCGGC
TGCTATACGGTCCACTATGTGAAGCGTCTGCTGGAGACGATTTTCGTGCA
CCGCTTCTCGCACGCCACCATGCCGCTGAGGAATCTCTTCAAGAACTGCA
CATACTACTGGGGATTCACCGCCTATGTGTCCTACCACGTGAACCATCCG
CAGTTCACCTCGCCCTGCATGTGCACCGTTTGGGGAGCTCTTGGGGCATT
CGCTCTCTGCGAACTAGGAAACTTTTCGGTGCACATTGCCCTGCGCAACC
TGCGTCCGCCGGGAACAAAAGTGCGCAAGATTCCGGTGGCCGATGGAAAT
CCCCTCACCAAGCTGTTCGACTTGGTTTCTTGCCCCAACTACACCTATGA
GATCGGTGCCTGGGTTTCATTCTCTGTGCTGACTTCTTGCCTGGCTGCCT
ATCTGTTCGCCTTTGCCGGAGCCTTCCAGATGACCATTTGGGCCTTGGCC
AAGCATCGCAACTACAAAAAGGAGTTTAAGGACTACCCTCGCCAGCGCCG
CTCCATCTTCCCCTTCGTCCTGTAGAAGCTTTCTAGACCAT
BS21738.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:48:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sc2-RA | 909 | CG10849-PA | 1..909 | 17..925 | 4470 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:49:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sc2-RA | 1105 | CG10849-RA | 50..958 | 17..925 | 4470 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:48:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3903541..3903911 | 17..387 | 1795 | 98.9 | Plus |
| 3L | 28110227 | 3L | 3904069..3904285 | 388..604 | 1085 | 100 | Plus |
| 3L | 28110227 | 3L | 3904684..3904888 | 721..925 | 1010 | 99.5 | Plus |
| 3L | 28110227 | 3L | 3904506..3904621 | 605..720 | 580 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:48:58 has no hits.
BS21738.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 15:39:33 Download gff for
BS21738.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sc2-RA | 31..939 | 17..925 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:37:33 Download gff for
BS21738.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sc2-RA | 50..958 | 17..925 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:42:59 Download gff for
BS21738.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sc2-RA | 50..958 | 17..925 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:42:59 Download gff for
BS21738.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3904684..3904888 | 721..925 | 99 | | Plus |
| 3L | 3903541..3903911 | 17..387 | 98 | -> | Plus |
| 3L | 3904069..3904285 | 388..604 | 100 | -> | Plus |
| 3L | 3904506..3904621 | 605..720 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:37:33 Download gff for
BS21738.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3903541..3903911 | 17..387 | 98 | -> | Plus |
| arm_3L | 3904069..3904285 | 388..604 | 100 | -> | Plus |
| arm_3L | 3904506..3904621 | 605..720 | 100 | -> | Plus |
| arm_3L | 3904684..3904888 | 721..925 | 99 | | Plus |
BS21738.pep Sequence
Translation from 16 to 924
> BS21738.pep
MELEILNAKNSKPYGKVKVPSGATPIGDLRALIHKTLKQTPHANRQSLRL
ELKGKSLKDTDTLESLSLRSGDKIYVKDLGPQIGWKTVFLAEYAGPLIVY
LIFYFRPELVYGKAASLPISLTTHIAAGCYTVHYVKRLLETIFVHRFSHA
TMPLRNLFKNCTYYWGFTAYVSYHVNHPQFTSPCMCTVWGALGAFALCEL
GNFSVHIALRNLRPPGTKVRKIPVADGNPLTKLFDLVSCPNYTYEIGAWV
SFSVLTSCLAAYLFAFAGAFQMTIWALAKHRNYKKEFKDYPRQRRSIFPF
VL*
BS21738.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:59:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sc2-PA | 302 | CG10849-PA | 1..302 | 1..302 | 1610 | 100 | Plus |
