BS21743.complete Sequence
2159 bp assembled on 2011-02-14
GenBank Submission: KX802712
> BS21743.complete
GAAGTTATCAGTCGACATGAATAAGAGAAACGAATCTGGGCTATTGCCGG
GCTCTCGGCACCGCTCGTGGTTGCAGTCCTTCCTCAAGATTACGGAGTCC
TGGAAGGAACCCGATTCCCAGAAGAACGAGGTTGAATTAAAGTCTGAATC
CACACAGCTTGAATTCCGCAAGCACAACACGCTTAAGGATGTTTCCGATC
GGGATGGCAAGCAGCTAGTGGATGAGATTGTCCACGGCATCTTCGACAAA
AAGCACGGTACCACCACACTATCAGAATCGGAGTGTTCGCTACAGGAGGA
CATCCGAGAGTCCTTGAGCATGGACCCTCGCCTGAAGCTGTGGTACGACA
CACTTGAAAACCGTGCGGCTGTGCAGGCGAAGATCCAGCGGAAGCTCGGC
CGCCGACCCGACGAAATGCTGATCAACGTGGGCAGCACAGTAGCTCCCAG
GGATCGAGGTACAGTGGTGCGGCTTCTCGACCTTGCCGGTCGCATGAATC
CCACTACTTTGATCCAGAAGAAACCTGCTGTTCTTCCCAGCAAATGCCAA
GTTCTACCAGAACTGCAAGAGACGCTTCCGTGCGCCGAGCAGGCCGGTCG
GGCGGACGTGGAGATCACCGGGCTAACCCGTGCCACCAAGCAGGAGATCC
TGGGCAGGGCGTACCAACGGCCCGAGATGCCCACTCCGTGGGAGAAGTCG
CGAATGCTGGAGAATCATATTGAGAACAAAAGCAGCGACATCATGCGCGT
CATCTCGTTCTTTCCGAATCTGGACAGATTGGAGGTGGTGGGTGGTCCCG
TGCAGCAGGAGTTTACCGACGGCGAAATCAGTCGTGTCGAGCGGGTGTCT
TGCGACTCAATTTTCAGCGTGAGCAGCACGTCTCAGATACTTCCCGACGA
GGAGCAAAAAGAGGAGAGCCCTTCCAGGGCAGAACCTGACCAGGGAAAGG
GAACGGAATCTGTGGTTTCCCGTGCAGCCGTTAAGATTAACGGTATGCTG
TTCGTAAACTCAGGAAAGCGCATCTTTTTGCCGGAGATCGCAAACGTTTT
CTTCGAATGTCATCCGTTCCAGAACGTGGTCAAGGATGTGGCTAGCGTGG
AGAACGTCGGTGGTCATGTGCTCACCTGCCAGTGGTGCTCTGTCGAATCA
AAGCGTGCCCCCAAAAGCACTGCCCAATGCCATAACTTCCTTATGTCCCA
GGCCAACTTCACTGTTTTCCCAGGAGAGGTGCACGTATGCCGAGCGCTTT
TCAGGCCACGTGGATGCTACCTGCTGAAGCAGCGATATGAGCTCCGCATT
TTTCCCAACGTAATCGGTTCTGTGCGCGGTATTTTCTTGGCCCGGCTTAC
GGGGCACTGTACTCCCGCGCCGGAGTACACAAACAAGCTGCGGCGGCACC
AACAACTGCTTACGGACAAGGCGAAGAAGAAAATGTCCAATGACCTGAAC
AAGTACCAGGCGTCCGTAGTGCCCCTTTTGCATCCGCCCGAAGTGATATG
TCCTTATGAAAGAGTTTTGGATGAGAGGGAGGTGTTCAATGTAGAAAATC
CCGGCTACAAGTGCGAACGGTTTGATGATCTGGAAAAATTGAAGTCACTA
TACAAAGCTCTAAAGAAACCGAGGGAGCCCGCTTGGGATCTGCGCCTGCA
GACGGTTCGTGAGGTAATCCTGCGGCTTCCGGACTCTAATAAACGGAAGT
TCTATTACGGAAAACTGGTCAAAGTTCAGGAGGAACTAAAGCTGGGTAGA
GGCAGAGATTCTCTTACGCATTTCAGTCGGAATGACGAGAGGATTCGATC
CAGGTTCATCTACGTGAGGGGTTGTATAGGCAATGGAATCCAGGAATGGG
AGGAGATGATGGCGTCGATGGAACTGAGTGGCCTCAGATTGGAGATAAGT
CACTTTCAGCTAAGAGAGGAAGAAGGGGAGCCGCCATCCGACGGGACCGA
TTATAATGGCAAAGAATCGGAGGAAAAGCCGTGGATCCAGCAGCTGCGTA
GGAAAAACCCATATCAGTATCTCTTGAAAAAACTGCGATCGCGGAAATCT
TACAGGGATAGCCTCTACATGCAGACCTACTCGCACCTGTGTGACATGGC
CGAGAACGTGGTTTCTGTTATCGAGAGCACCAAAAACGCTTAAAAGCTTT
CTAGACCAT
BS21743.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:30:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30384-RA | 2127 | CG30384-PA | 1..2127 | 17..2143 | 10635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:30:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30384-RA | 2302 | CG30384-RA | 62..2189 | 17..2144 | 10640 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:30:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7183058..7185185 | 17..2144 | 10640 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:30:25 has no hits.
BS21743.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 17:31:23 Download gff for
BS21743.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30384-RA | 62..2186 | 17..2141 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:55:36 Download gff for
BS21743.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30384-RA | 62..2186 | 17..2141 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:26:53 Download gff for
BS21743.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30384-RA | 62..2186 | 17..2141 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:26:53 Download gff for
BS21743.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7183058..7185182 | 17..2141 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:55:36 Download gff for
BS21743.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3070563..3072687 | 17..2141 | 100 | | Plus |
BS21743.pep Sequence
Translation from 16 to 2142
> BS21743.pep
MNKRNESGLLPGSRHRSWLQSFLKITESWKEPDSQKNEVELKSESTQLEF
RKHNTLKDVSDRDGKQLVDEIVHGIFDKKHGTTTLSESECSLQEDIRESL
SMDPRLKLWYDTLENRAAVQAKIQRKLGRRPDEMLINVGSTVAPRDRGTV
VRLLDLAGRMNPTTLIQKKPAVLPSKCQVLPELQETLPCAEQAGRADVEI
TGLTRATKQEILGRAYQRPEMPTPWEKSRMLENHIENKSSDIMRVISFFP
NLDRLEVVGGPVQQEFTDGEISRVERVSCDSIFSVSSTSQILPDEEQKEE
SPSRAEPDQGKGTESVVSRAAVKINGMLFVNSGKRIFLPEIANVFFECHP
FQNVVKDVASVENVGGHVLTCQWCSVESKRAPKSTAQCHNFLMSQANFTV
FPGEVHVCRALFRPRGCYLLKQRYELRIFPNVIGSVRGIFLARLTGHCTP
APEYTNKLRRHQQLLTDKAKKKMSNDLNKYQASVVPLLHPPEVICPYERV
LDEREVFNVENPGYKCERFDDLEKLKSLYKALKKPREPAWDLRLQTVREV
ILRLPDSNKRKFYYGKLVKVQEELKLGRGRDSLTHFSRNDERIRSRFIYV
RGCIGNGIQEWEEMMASMELSGLRLEISHFQLREEEGEPPSDGTDYNGKE
SEEKPWIQQLRRKNPYQYLLKKLRSRKSYRDSLYMQTYSHLCDMAENVVS
VIESTKNA*
BS21743.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:10:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30384-PA | 708 | CG30384-PA | 1..708 | 1..708 | 3695 | 100 | Plus |
| CG33140-PA | 720 | CG33140-PA | 56..716 | 65..706 | 859 | 33.2 | Plus |
| CG11060-PA | 706 | CG11060-PA | 49..704 | 66..705 | 762 | 29.7 | Plus |
| CG30385-PA | 536 | CG30385-PA | 106..533 | 212..705 | 353 | 25.2 | Plus |
