Clone BS21752 Report

Search the DGRC for BS21752

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:217
Well:52
Vector:pDNR-Dual
Associated Gene/TranscriptCG11369-RA
Protein status:BS21752.pep: full length peptide match
Sequenced Size:2036

Clone Sequence Records

BS21752.complete Sequence

2036 bp assembled on 2011-02-14

GenBank Submission: KX804421

> BS21752.complete
GAAGTTATCAGTCGACATGCATCAGAATATATGGAGCGCGCCGCAGGTGG
GTGGTTCTGGTGGCGCTTTGAAGGCCTTGGCCAGGAATGTGGCCAATCAT
CTGAAGCTGAACCGCAGCAATATGAAACGAGTGGTGGCCCAGGTGGTCGC
CGAGCACCATACCCTCGGGGAGGTGGCCGACTACAAGGGTCACATGTACT
TTGCCAAGCCGGATCGCTTGAATTTTCACGAGCTGATTGCCCAGTCCAAG
GAGGCCTTCGATGATCTGTTGCTCCACGAACCGCGATCTGTGAAAAAGCA
AGCAATCACGAAACGTTCCAAGCATCCGACCAATCCCAACGTTAAACTAC
AGATGACAGTATCACCACCGCAATTAGAAAAACCACAAAAGAAACAATTA
ACTTTTAAAAAGTCTGGTCTACCGAAAAAACATTCAAGGCCAAAAATTCG
GAGTCGGAAGAAGAGTTCCACCACCATTTTTCAGCTGGCGGATGCAGGTC
GTCGTAGTCTAAATGGTGTAATCATTGACGAAACTCATTTGCCCCTAGAT
GGTGAGCAAAGGGAGATCCTTTTGCATGTGCCACCGTCGCTAGTCAAGCG
GTCCCGAAGGCGTCTCCGATCTGCCCAGATCAAGAATACATCGGAGAAAT
GCCCACCGCAGAAACCGGATAAGGATCCCGATCAGAAGAAGACAGGATCA
CAACAGAAGGATGGCGAGAAATTCACCGAGGAGAAGATTCTTCAAGTTCA
AAAGCGTCAACCCGAGAAGAAACGCAGCGAAGAACCGAAACCAGTAAAGA
AAATTCAGGAAAACCACCAGAAAGAGCTGATTCGGTCACCTTCTCGCCCC
CGATCGGGGTCCCCTTCGGTTCCTCAGACCCGACGGTCTCCTTCACCAGT
TCGTTCACAAAAACTGACATCTGTTCAGAAAGCGAGCCAAGCTCTTCGCT
CACCACCCCACAAGACATTAAATGTCAAGAATCAACGCATCAGGGCGGGA
GACACCAAAATGGCAACTTCCAAGCCTTCGGAAAAGATCAAATCGAGATC
GATGCTAAGAACAGTCAAGAAAAAACTTCCATTGCCGCAAAGAAGCTACG
ACAAGCCGTGGATACTGAAACGCTCTAAAAAGAGACGCTTGGCGGGAGGA
TCTCAATTAAAGAAAAATCTACAGCGACCGATCAATATCGATGTGAAGAG
AAGGGAAAAGTCAGGTAAGGGAGGGAAAATCCAGCATTCAGCAAGGAGCA
CCAAGGTGGAGCCAACGAAAATCTCTGCCCAGATTAAAGCCACATCACAT
GTTGGACGCCAAATGCAAAGGGTAAACTTTCCGTGGTATACTCCCTATCA
ATTTCAAGGTGCCGCCGGAGCAACCCAAATACCAAATGCCGGGGTCGCCA
TACCGCCGTGTCAATTGCTAAAAGATAAAAGCCGTAAACTCATTCAAAGA
CTATCGGTAACCCAACCAATTCCCCAAATTAAACGTCCCAATATCACCAG
TCGCCAAAGGCATAATCTCCGTTTGCGGGAGCGTTTGATGAGAGATTTGC
AACGCGAAGAGGACATCGATGATCCACTAAGTAATGGATCGGGGGTTCTT
CGCCGAGCCCGCGGTGGAATGCAATCATCTCAGCAAATTAAGGAACCTGA
GCAACCTGAAAAGGAGCAGGATCATCGTTCTGTGGAGCGCGTGAGCTCGC
GAATCAAGCGTTTGCCAAAGGGAAGACGCTATCGCCAGCCCATCGCCACC
AGCGAGCGGATCATGATCCCGCCACCGAAGGTGAATAATAATAATAATAC
TAATAATAAATCGATGTCTCCAAGTCGCCCCAACTCCATTCCACGAGTCC
GTCGAAGATTTCGATCCGTTCTGGTGGACAGCAGTTTGGGAAGTATCGCC
TTAATGGGTCAGCCGGTGCAATCAAAGCAAACACTAACTCCCGCTAAACG
TCATCTTACCATTGCCTTTATGAACAAGAGATCAGAACGAACCAATGCAG
CCGTTCAGCCCTGGAAGTAGAAGCTTTCTAGACCAT

BS21752.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:24:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG11369-RA 2004 CG11369-PA 1..2004 17..2020 10020 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:24:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG11369-RA 2478 CG11369-RA 309..2314 17..2022 10030 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:24:10
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7574598..7576603 17..2022 10030 100 Plus
Blast to na_te.dros performed 2014-11-27 01:24:12
Subject Length Description Subject Range Query Range Score Percent Strand
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 6746..6864 293..411 117 57.5 Plus

BS21752.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 15:32:26 Download gff for BS21752.complete
Subject Subject Range Query Range Percent Splice Strand
CG11369-RA 309..2312 17..2020 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:53:03 Download gff for BS21752.complete
Subject Subject Range Query Range Percent Splice Strand
CG11369-RA 309..2312 17..2020 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:24:46 Download gff for BS21752.complete
Subject Subject Range Query Range Percent Splice Strand
CG11369-RA 309..2312 17..2020 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:24:46 Download gff for BS21752.complete
Subject Subject Range Query Range Percent Splice Strand
X 7574598..7576601 17..2020 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:53:03 Download gff for BS21752.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 7468631..7470634 17..2020 100   Plus

BS21752.pep Sequence

Translation from 16 to 2019

> BS21752.pep
MHQNIWSAPQVGGSGGALKALARNVANHLKLNRSNMKRVVAQVVAEHHTL
GEVADYKGHMYFAKPDRLNFHELIAQSKEAFDDLLLHEPRSVKKQAITKR
SKHPTNPNVKLQMTVSPPQLEKPQKKQLTFKKSGLPKKHSRPKIRSRKKS
STTIFQLADAGRRSLNGVIIDETHLPLDGEQREILLHVPPSLVKRSRRRL
RSAQIKNTSEKCPPQKPDKDPDQKKTGSQQKDGEKFTEEKILQVQKRQPE
KKRSEEPKPVKKIQENHQKELIRSPSRPRSGSPSVPQTRRSPSPVRSQKL
TSVQKASQALRSPPHKTLNVKNQRIRAGDTKMATSKPSEKIKSRSMLRTV
KKKLPLPQRSYDKPWILKRSKKRRLAGGSQLKKNLQRPINIDVKRREKSG
KGGKIQHSARSTKVEPTKISAQIKATSHVGRQMQRVNFPWYTPYQFQGAA
GATQIPNAGVAIPPCQLLKDKSRKLIQRLSVTQPIPQIKRPNITSRQRHN
LRLRERLMRDLQREEDIDDPLSNGSGVLRRARGGMQSSQQIKEPEQPEKE
QDHRSVERVSSRIKRLPKGRRYRQPIATSERIMIPPPKVNNNNNTNNKSM
SPSRPNSIPRVRRRFRSVLVDSSLGSIALMGQPVQSKQTLTPAKRHLTIA
FMNKRSERTNAAVQPWK*

BS21752.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:09:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG11369-PA 667 CG11369-PA 1..667 1..667 3418 100 Plus