BS21762.complete Sequence
1358 bp assembled on 2011-02-14
GenBank Submission: KX800644
> BS21762.complete
GAAGTTATCAGTCGACATGCAGCAGCTCCTGGTCGTGGCCCTGGTGGCGG
TGGCCATCGCGTCCTTGCCCCAACTGGCCGCAGGTAAAAAGCTGGGGAAG
CGCTGCGTGAACTGCACGTACCGCACTTACTACACCTACGGCGATGGGCG
ATCCCTGCAGCGGGTTGTCTATAGAGATCCGGTCTACACACGTGCGCAGT
CCTACGCGAGCGGATGCAGCGGTAGCCCGTGCGGCGTGAACGCCGTGTGC
CAGGAGGCCTCCGGAGGACGGCCCGTCTGCTCGTGCCCGCCCGGATTCAG
CGGTAATCCGCTCACCCACTGCAATCGCGGCGAGTGCCTGGACAACGTCG
ACTGTCGCGACAACCTGCAGTGCAAGGACAATCGCTGCGTTAATCCCTGC
GTGGGTGCCTGTGGCATTGGCTCCAATTGTGACGCCCGCAACCACGTGGC
CGTGTGCAGCTGCCCCGCCGGCTACAATGGCGACCCATACCACGCCTGCC
ACCTCAACGATCCGGAGGAGCAGTGCCATCCCAGTCCGTGCGGCGTTAAC
ACCAAGTGCGAGATCATCAACGGCGTGCCCACCTGCTCATGCGTTCACGG
CTATGTGGGCAATCCGCTGAGCGGCTGTCGCCACGAGTGCGATCACGATG
GCGACTGCAGCAGCCGGGACATGTGCTCCAGCAACTTCAAGTGCGTGCCG
GCATGCGGGCAGTGCGGCACTGGCGCCACCTGCCGAACGGTCAGCAATCA
CCGGGCTGTCTGCGAGTGCCCCAAGGGCTACATTGGCAGCCCGTACACGG
AGTGCCGACCGGAGTGCTATGGCGATGCCGACTGCCCGGCCGGGCGACCC
GCCTGCTTCTACGGCATCTGCAAGAACACCTGCGAGGGTGCCTGCGGCAT
CGGCGCCGACTGCAACCTGCGCGGCCTCACACCCGTCTGCAGCTGCCCCC
GCGACATGACCGGCGATCCCTTCGTGCGCTGCCGTCCCTTCACCAAGGAG
GACCTTTGCGACCCCAATCCGTGCGGCACCAACGCCATCTGCGTGCCCGG
ACACGACAACACCGGCCGCGAGCGGCCCGTCTGCAACTGCCTGCCCGGCC
ACACCGGCAATCCGCTGAGCCACTGCACCCGGGGTGAGTGCCTGAGCAAC
AACGAGTGCCCCGACCATCGCGCCTGCATCAACTACCAGTGCATCGATCC
CTGCATCGGCAAGTGTGCCACTGGAGCCAGCTGCGAGCCCAAGGCCCACC
TGGCTGTCTGCCGCTGTCCACAGGGACAGTCGGGCGACGCCCTGGTGTCC
TGTCGCCAGACGCGCACCTTTCCCGTGGCCAAGTACCACTGAAAGCTTTC
TAGACCAT
BS21762.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:25:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9572-RA | 1326 | CG9572-PA | 1..1326 | 17..1342 | 6630 | 100 | Plus |
| CG9572-RB | 1323 | CG9572-PB | 3..1323 | 22..1342 | 6605 | 100 | Plus |
| CG9572-RD | 1215 | CG9572-PD | 67..1215 | 194..1342 | 5745 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:25:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9572-RA | 1667 | CG9572-RA | 136..1461 | 17..1342 | 6630 | 100 | Plus |
| CG9572-RB | 1664 | CG9572-RB | 138..1458 | 22..1342 | 6605 | 100 | Plus |
| CG9572-RD | 1556 | CG9572-RD | 202..1350 | 194..1342 | 5745 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:25:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20154197..20154815 | 515..1133 | 3095 | 100 | Plus |
| X | 23542271 | X | 20150597..20150837 | 194..434 | 1205 | 100 | Plus |
| X | 23542271 | X | 20155098..20155308 | 1132..1342 | 1055 | 100 | Plus |
| X | 23542271 | X | 20150061..20150236 | 19..194 | 880 | 100 | Plus |
| X | 23542271 | X | 20150945..20151026 | 434..515 | 410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:25:31 has no hits.
BS21762.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 15:32:28 Download gff for
BS21762.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9572-RA | 134..1458 | 17..1341 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:53:34 Download gff for
BS21762.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9572-RA | 136..1460 | 17..1341 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:25:12 Download gff for
BS21762.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9572-RA | 136..1460 | 17..1341 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:25:12 Download gff for
BS21762.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20150060..20150236 | 17..194 | 99 | -> | Plus |
| X | 20150598..20150836 | 195..433 | 100 | -> | Plus |
| X | 20150945..20151026 | 434..515 | 100 | -> | Plus |
| X | 20154198..20154814 | 516..1132 | 100 | -> | Plus |
| X | 20155099..20155307 | 1133..1341 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:53:34 Download gff for
BS21762.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20044978..20045059 | 434..515 | 100 | -> | Plus |
| arm_X | 20044093..20044269 | 17..194 | 99 | -> | Plus |
| arm_X | 20044631..20044869 | 195..433 | 100 | -> | Plus |
| arm_X | 20048231..20048847 | 516..1132 | 100 | -> | Plus |
| arm_X | 20049132..20049340 | 1133..1341 | 100 | | Plus |
BS21762.pep Sequence
Translation from 16 to 1341
> BS21762.pep
MQQLLVVALVAVAIASLPQLAAGKKLGKRCVNCTYRTYYTYGDGRSLQRV
VYRDPVYTRAQSYASGCSGSPCGVNAVCQEASGGRPVCSCPPGFSGNPLT
HCNRGECLDNVDCRDNLQCKDNRCVNPCVGACGIGSNCDARNHVAVCSCP
AGYNGDPYHACHLNDPEEQCHPSPCGVNTKCEIINGVPTCSCVHGYVGNP
LSGCRHECDHDGDCSSRDMCSSNFKCVPACGQCGTGATCRTVSNHRAVCE
CPKGYIGSPYTECRPECYGDADCPAGRPACFYGICKNTCEGACGIGADCN
LRGLTPVCSCPRDMTGDPFVRCRPFTKEDLCDPNPCGTNAICVPGHDNTG
RERPVCNCLPGHTGNPLSHCTRGECLSNNECPDHRACINYQCIDPCIGKC
ATGASCEPKAHLAVCRCPQGQSGDALVSCRQTRTFPVAKYH*
BS21762.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:09:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9572-PA | 441 | CG9572-PA | 1..441 | 1..441 | 2579 | 100 | Plus |
| CG9572-PB | 440 | CG9572-PB | 2..440 | 3..441 | 2569 | 100 | Plus |
| CG9572-PD | 404 | CG9572-PD | 1..404 | 1..441 | 2324 | 91.6 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 13030..13462 | 52..436 | 801 | 37.9 | Plus |
| dp-PY | 18095 | CG33196-PY | 15140..15559 | 67..436 | 799 | 38.1 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 5698..6119 | 64..436 | 778 | 36.8 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 12402..12824 | 67..437 | 774 | 36.6 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 6553..6970 | 67..429 | 769 | 37.7 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 8577..8992 | 67..430 | 765 | 36.8 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 11126..11538 | 67..429 | 764 | 35.2 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 6237..6645 | 67..430 | 758 | 36.3 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 9852..10265 | 67..432 | 757 | 37 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 7938..8353 | 67..429 | 753 | 35 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 12727..13144 | 67..438 | 747 | 37.2 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 13471..13890 | 67..433 | 744 | 36.3 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 7198..7609 | 67..429 | 742 | 37.2 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 4946..5369 | 67..437 | 742 | 36.1 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 9071..9521 | 30..429 | 741 | 36 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 8903..9312 | 67..436 | 738 | 35.2 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 13367..13787 | 67..436 | 732 | 36.8 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 7300..7723 | 67..439 | 731 | 33.9 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 11450..11857 | 67..430 | 731 | 35.4 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 13144..13562 | 60..429 | 730 | 36.5 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 8157..8564 | 67..430 | 728 | 35.5 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 4094..4519 | 67..441 | 726 | 34.9 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 7377..7824 | 32..436 | 725 | 34.7 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 9291..9740 | 33..437 | 725 | 34.6 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 5375..5800 | 67..436 | 724 | 34.2 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 10909..11323 | 63..429 | 724 | 35.5 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 8784..9206 | 56..436 | 720 | 36.1 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 9430..9842 | 67..433 | 720 | 36.3 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 10382..10796 | 67..429 | 719 | 36.4 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 6085..6540 | 20..429 | 717 | 33.7 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 7832..8249 | 67..430 | 717 | 35 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 4497..4932 | 43..429 | 713 | 34.4 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 7627..8030 | 67..429 | 713 | 35.2 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 5594..6005 | 67..429 | 712 | 37 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 4841..5258 | 67..436 | 712 | 35.7 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 5908..6328 | 61..429 | 711 | 36.9 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 8016..8463 | 33..437 | 711 | 34.1 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 11342..11751 | 67..431 | 709 | 36.4 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 10174..10580 | 67..431 | 708 | 34.8 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 12076..12498 | 55..433 | 706 | 33.8 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 9540..9944 | 67..429 | 703 | 34.7 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 10274..10684 | 67..429 | 700 | 36 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 10486..10901 | 67..429 | 698 | 35 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 5270..5695 | 67..437 | 697 | 35.7 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 5476..5897 | 52..429 | 696 | 34.5 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 13793..14171 | 67..436 | 695 | 37.7 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 6986..7394 | 67..431 | 694 | 35.1 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 12496..12923 | 51..431 | 693 | 36 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 6648..7075 | 55..430 | 692 | 34 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 6757..7179 | 55..429 | 692 | 35.3 | Plus |
| dp-PZ | 15998 | CG33196-PZ | 5052..5467 | 67..429 | 685 | 33.9 | Plus |
