BS21771.complete Sequence
1550 bp assembled on 2011-02-14
GenBank Submission: KX802494
> BS21771.complete
GAAGTTATCAGTCGACATGAAACTACCGTTAGCTTGCGCTGTGCTAAGCT
GCTGCTTCTTTTTGTTGGCAGCCGCCTCATCTTCTCCAGCTGCCGATGCT
TCTTCTTCAAAGCCCGCTTCATCTTCGGCTGAGACCTCATCCTCCGCTAA
GCCAAAAAGAGATGCTGGCCTAAGTTTCGGAGGAATATCCAGCTATCACG
GCCCTTCTCACAAATATCTGCCGCCCGCCTATGAGAGTCACCTTAACCTC
GGCAGTTTCCATGGAAGCTCGGCTGGTTATTCCGATTACCCCAGTCACTT
CAAGGGCGAGAGCAGTTACGGACACCACTTCGCACACGGACACTCCGGAA
GCCACGGCTACGCCAGTTCCAGTGGCCATGGAAGGCCCCATCATTACAGC
GGTAGTGGAGTTCCTAAAATCGAAACCTACATCGTTCAAACAAGTGGCGG
CTCGAGTTCCGGTCACAACTACCATGGTCAGGGACATGGACATGGAATCG
GTCACGGGATCAGTCATGGAATCAGTCACGGCCTGAGTCACGGGCATGGA
TCTGGATTGGCCTTTAAGTACGCACCATCTACCAGTGGAGCCTATCTGAA
TCTCGTTGGGAATGAACACAAGACCAGCACATATGTGGTGGCCACTCCCG
AGTACTCCGGACACAGCCACGGAGCGAGGGGCAGCACCCACGGAATTGGC
TACGGATCGGCACCAGCCCACAGACCCAGCTACGGTGGCCACCTGCAAAG
TCACGGCTATGGCAACAACTTTGGCCATGGCCCCAGCCATCACATCGCCC
ATGAACCAGTCAGTCACGGACCTATCCAAAGTTTGGATCACGGTCTGGAG
CATGCCTTGGAGCACGGTCTGAGCCACGCCCTGGGATTGGGTCACTCTTC
GGGAGGACAGTTCCCACAGCACGCGCTGCCCCAGCCGGCGGAGGAGCATT
CTGGGTACTCCTACGATGCTCCCGCCACGCCTTTTGGAAAGGGAGTGCCG
TTGAGCAGTTACGGCGTACCACTCATACCCGGCTACGATCACCAGGAGTC
ACTGCCGGAGCCAGTGCAAGTGCAGGTGCTGGAGCAGGAGCACAAGGGCG
ATCGGGAGCAGGAGAGGGAAACACCGGTTTATGCTCTGGGCCACAAGGGC
CTGGGTCACTTCAGCTACACGGCCAGCAAGCCACAGGCTCTCCACACCGA
CGTTCTCAGCTCTGCCCACCACTCCGTCCAGTCCGGAGCACCCAGCCACG
ACCTAGACGTCTCCAAGGCGCCTTTTAGGCCCAGTGCCTTTCTAGGGGCC
AAGCACGAGTCCGGATCGAATTCCATTTCCGGCTACGACTACGCCACGCC
CAGCTCCACATTCCTGCAGGCTCCTTCTTCGCCAGGCTATGACTACCAGG
CTCCGGCGCAACTATACGGACCACCCGGCCACTCCGGGGACTCGGCCACG
CCTATTTTCGAACCGGAGGCGACCTACCTGCCTCCTGCCAGCAGCTACGG
CCCAACGGCCGCGTCCTCCCATGGTTACCACTAAAAGCTTTCTAGACCAT
BS21771.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:24:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11382-RC | 1518 | CG11382-PC | 1..1518 | 17..1534 | 7590 | 100 | Plus |
| CG11382-RB | 1518 | CG11382-PB | 1..1518 | 17..1534 | 7590 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:24:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11382-RC | 1744 | CG11382-RC | 127..1646 | 16..1535 | 7600 | 100 | Plus |
| CG11382-RB | 1884 | CG11382-RB | 127..1646 | 16..1535 | 7600 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:24:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1210096..1211615 | 16..1535 | 7600 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:24:34 has no hits.
BS21771.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 15:32:27 Download gff for
BS21771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11382-RB | 1..1516 | 17..1532 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:53:12 Download gff for
BS21771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11382-RB | 128..1643 | 17..1532 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:24:54 Download gff for
BS21771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11382-RB | 128..1643 | 17..1532 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:24:54 Download gff for
BS21771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1210097..1211612 | 17..1532 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:53:12 Download gff for
BS21771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1104130..1105645 | 17..1532 | 100 | | Plus |
BS21771.pep Sequence
Translation from 16 to 1533
> BS21771.pep
MKLPLACAVLSCCFFLLAAASSSPAADASSSKPASSSAETSSSAKPKRDA
GLSFGGISSYHGPSHKYLPPAYESHLNLGSFHGSSAGYSDYPSHFKGESS
YGHHFAHGHSGSHGYASSSGHGRPHHYSGSGVPKIETYIVQTSGGSSSGH
NYHGQGHGHGIGHGISHGISHGLSHGHGSGLAFKYAPSTSGAYLNLVGNE
HKTSTYVVATPEYSGHSHGARGSTHGIGYGSAPAHRPSYGGHLQSHGYGN
NFGHGPSHHIAHEPVSHGPIQSLDHGLEHALEHGLSHALGLGHSSGGQFP
QHALPQPAEEHSGYSYDAPATPFGKGVPLSSYGVPLIPGYDHQESLPEPV
QVQVLEQEHKGDREQERETPVYALGHKGLGHFSYTASKPQALHTDVLSSA
HHSVQSGAPSHDLDVSKAPFRPSAFLGAKHESGSNSISGYDYATPSSTFL
QAPSSPGYDYQAPAQLYGPPGHSGDSATPIFEPEATYLPPASSYGPTAAS
SHGYH*
BS21771.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:09:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11382-PC | 505 | CG11382-PC | 1..505 | 1..505 | 2757 | 100 | Plus |
| CG11382-PB | 505 | CG11382-PB | 1..505 | 1..505 | 2757 | 100 | Plus |
| Muc91C-PB | 949 | CG7709-PB | 525..930 | 21..466 | 168 | 26 | Plus |
| Muc91C-PA | 950 | CG7709-PA | 526..931 | 21..466 | 168 | 26 | Plus |
| Muc91C-PB | 949 | CG7709-PB | 406..911 | 18..496 | 159 | 24.9 | Plus |
| Muc91C-PA | 950 | CG7709-PA | 407..912 | 18..496 | 159 | 24.9 | Plus |
| CG14191-PA | 193 | CG14191-PA | 12..191 | 74..251 | 157 | 30.8 | Plus |
