BS21775.complete Sequence
1657 bp assembled on 2011-02-14
GenBank Submission: KX803125
> BS21775.complete
GAAGTTATCAGTCGACATGGAGTACGAGAAAATGTTGTACATGCCAGCAG
CCAGTGAGATGCCTCACAGTCCGCAGCTGAAGCCACATCAGTTCCAGGCC
CACACGCCGACGGATCAGTACTCATCCTATGCGGACAACTTCGACCTGTC
GCTGCTGCCGCAGGAGTCCGCATCCATTCCCACCACAGTCTTCCAGTACA
ACGCCCCCCAGATCAAGGTCGAGTGCGCCTGGGATAGCCAGCCCATCCAG
CAGCAACAGCAGCCCACTGCGCCCTATACCAACCCCTCCAGCCACCAGCT
GATTCCTCCGCCCGCCTATCCCCACAGTGCCTATCCCTCTCCGCAATCCA
GTCCGCTGCAGTCGGAGTTCGCTGCCTATGGGCTTGGCAGATTTGGCGGT
AGCTACGACAGTCTGAACAGCCCATCGCCCTCGCTGGAGGCGGTTAGCAT
CAAGCAGGAGCTGCACATCCTGCCACCCTCTCCGCCGGAGTCCAACTGCG
AGACGCCATCACCCAGATCCTCCTGCGGGGAGAGCATCAAGGCCGAGCCC
TTGGATGCGGACATCGAGAGCCTCATCGATCTGAACTCTCTGCTGCAGCA
GCAGAGTCTACAAAGCCCACAGAATCTGCAGGACACCAAGCCCGATCACC
AGCTACTGCGGGAGTGCCTCGAAGACACCAGCTTCCAGAAGCGCCACAAT
CTGAAGCCTCTGGCTCTGGAATCCTTCATCGGAGGCTTGGCCGAAGTGCG
CGGCGACTTTGAGCCCGTCATTTCACTGGCCCTAGAGCATGCCAAACGAG
AGGCGGACGCCATCTGCGCGGAGCTGCAAATATCGCAGGATCCCAATGGC
TGGTCGCCCGCCCAGGTACACGCATGGCTCCGATCCACCTTGGCCCAGTT
CAGATTGCCGCCGGTGGCCGATTTGGAGCTGCACTTCTGCGAAAACGGAG
CCGCACTGGCATTACTCAGCGAGGAGGAATTCGTGCGCCGACTACCAGAG
AGCGGCAGCACGCTGCACGCCCAGTTGGAAATTTGGAAGATGGCCTACGC
GGACCAGCCCGCTCATCAGCAGCATTCCCAGCAGTCTGCGAGCACTGATC
ACTGGCCAGCAAGCTATGCGATGCCCCATTTGGACCTGGACTACAACGAG
GACAGCGAAGATGACGACGACATGGAAGCAGATGCACAAGTTGCACCCCT
GAACGGCAGTACCACTTCACCGCCCGCTACCAACGCTTCCAACGGCGGTA
CGGCGACAGTAAAACGACCGAATGGTGGACGGACCGGCGGTGGGGGCTCC
CACATCCACCTGTGGCAGTTCCTCAAGGAGCTGCTGGCTTCGCCCCAGGT
GAACGGCACAGCCATCCGGTGGATCGACCGAAGCAAGGGCATCTTCAAGA
TCGAGGACTCGGTGAGGGTGGCCAAGCTGTGGGGTCGGCGCAAGAACCGA
CCGGCGATGAACTATGATAAGTTGTCCCGCTCCATCAGGCAGTACTACAA
GAAGGGAATCATGAAGAAGACGGAGAGGTCACAGCGGCTGGTCTACCAGT
TCTGCCATCCCTACAGCCAGTAGAAGCTTTCTAGACCATTCGTTAGGCGC
CCGAAAAGGGAGGTAAGTGGTCTATAATCTTCAATCTATAATTCTATTAA
ATTCCAA
BS21775.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:26:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ets98B-RA | 1557 | CG5583-PA | 1..1557 | 17..1573 | 7785 | 100 | Plus |
| Ets98B-RB | 1515 | CG5583-PB | 1..1515 | 59..1573 | 7575 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:26:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ets98B-RA | 3402 | CG5583-RA | 555..2111 | 17..1573 | 7785 | 100 | Plus |
| Ets98B-RB | 2377 | CG5583-RB | 119..1635 | 57..1573 | 7585 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:26:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27743749..27744531 | 57..839 | 3915 | 100 | Plus |
| 3R | 32079331 | 3R | 27746661..27747075 | 1159..1573 | 2075 | 100 | Plus |
| 3R | 32079331 | 3R | 27746411..27746576 | 999..1164 | 815 | 99.4 | Plus |
| 3R | 32079331 | 3R | 27744591..27744752 | 839..1000 | 810 | 100 | Plus |
| 3R | 32079331 | 3R | 27737092..27737133 | 17..58 | 210 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:26:06 has no hits.
BS21775.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 15:32:31 Download gff for
BS21775.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets98B-RA | 553..2112 | 17..1580 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:53:47 Download gff for
BS21775.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets98B-RA | 555..2114 | 17..1580 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:25:24 Download gff for
BS21775.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets98B-RA | 555..2114 | 17..1580 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:25:24 Download gff for
BS21775.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27737092..27737133 | 17..58 | 100 | -> | Plus |
| 3R | 27743751..27744531 | 59..839 | 100 | -> | Plus |
| 3R | 27744592..27744752 | 840..1000 | 100 | -> | Plus |
| 3R | 27746413..27746572 | 1001..1160 | 100 | -> | Plus |
| 3R | 27746663..27747078 | 1161..1580 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:53:47 Download gff for
BS21775.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23562814..23562855 | 17..58 | 100 | -> | Plus |
| arm_3R | 23569473..23570253 | 59..839 | 100 | -> | Plus |
| arm_3R | 23570314..23570474 | 840..1000 | 100 | -> | Plus |
| arm_3R | 23572135..23572294 | 1001..1160 | 100 | -> | Plus |
| arm_3R | 23572385..23572800 | 1161..1580 | 99 | | Plus |
BS21775.pep Sequence
Translation from 16 to 1572
> BS21775.pep
MEYEKMLYMPAASEMPHSPQLKPHQFQAHTPTDQYSSYADNFDLSLLPQE
SASIPTTVFQYNAPQIKVECAWDSQPIQQQQQPTAPYTNPSSHQLIPPPA
YPHSAYPSPQSSPLQSEFAAYGLGRFGGSYDSLNSPSPSLEAVSIKQELH
ILPPSPPESNCETPSPRSSCGESIKAEPLDADIESLIDLNSLLQQQSLQS
PQNLQDTKPDHQLLRECLEDTSFQKRHNLKPLALESFIGGLAEVRGDFEP
VISLALEHAKREADAICAELQISQDPNGWSPAQVHAWLRSTLAQFRLPPV
ADLELHFCENGAALALLSEEEFVRRLPESGSTLHAQLEIWKMAYADQPAH
QQHSQQSASTDHWPASYAMPHLDLDYNEDSEDDDDMEADAQVAPLNGSTT
SPPATNASNGGTATVKRPNGGRTGGGGSHIHLWQFLKELLASPQVNGTAI
RWIDRSKGIFKIEDSVRVAKLWGRRKNRPAMNYDKLSRSIRQYYKKGIMK
KTERSQRLVYQFCHPYSQ*
BS21775.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:09:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ets98B-PA | 518 | CG5583-PA | 1..518 | 1..518 | 2750 | 100 | Plus |
| Ets98B-PB | 504 | CG5583-PB | 1..504 | 15..518 | 2678 | 100 | Plus |
| Ets97D-PA | 464 | CG6338-PA | 176..425 | 247..512 | 248 | 28 | Plus |
| Ets97D-PB | 484 | CG6338-PB | 176..425 | 247..512 | 248 | 28 | Plus |
| Ets96B-PC | 631 | CG6892-PC | 401..573 | 349..515 | 229 | 37.4 | Plus |
