BS21776.complete Sequence
704 bp assembled on 2011-02-01
GenBank Submission: KX802646
> BS21776.complete
GAAGTTATCAGTCGACATGAGTAAAACGAGCTTAGCGACGCAGACCAATG
GCACGGCGGAAAATGGAAACTGTTTTGATATCCTCAAAGTGTCTAATTTG
TTCGAAACCAGCCTTCTGGACGAGGATGACGTACAATTAGACGCATACTT
GGCAGCCTACGAGGAAATAATGAAGTTCTTCCAGCTCATGGGCAGTGTCT
TCAGTTTTGTCAGCAGCGATGTGCGCAGTAAAATAGATATCTTATACGCC
CTGAGAGCCAAGGACGCGGAGGAGCAGGAACACTTTAATACCTTCAGAAC
CATGCTGGATTACGAGAAGGAGGCCCAGTTGCTTACTCAGAAGGGTTACG
TGTCTGGCAGTCGAACGCTGCTACGTCTTCATCGCGGTCTTGACTTTGTC
TACGAGTTTCTCAATCGGATCCAGGCGATACCCGACGACCAAAAGACTGT
GGACGTGTGCAAGGAGGCCTACGATGACACCCTGGGCAAGCATCACTCAT
TCCTCATCCGCAAAGGAGCGCGCCTGGCTATGTACGCGATGCCCACTAGG
GGAGATCTTCTCAAGAAAGTGTGCTCCGATGTCGAGGCGGCCAAAGAGAA
CCTGCCTTCCATGCTGAAGCATATGAGAACCAACTACGATCGCACAGAAG
ACCTCTACACGCTATACGATCTACACAGCCTGCCTTAGAAGCTTTCTAGA
CCAT
BS21776.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:49:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30392-RB | 672 | CG30392-PB | 1..672 | 17..688 | 3360 | 100 | Plus |
| CG30392-RA | 672 | CG30392-PA | 1..672 | 17..688 | 3360 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:49:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30392-RB | 1080 | CG30392-RB | 98..771 | 17..690 | 3370 | 100 | Plus |
| CG30392-RA | 1141 | CG30392-RA | 98..771 | 17..690 | 3370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:49:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21291284..21291586 | 690..388 | 1500 | 99.7 | Minus |
| 2R | 25286936 | 2R | 21291642..21291859 | 392..175 | 1090 | 100 | Minus |
| 2R | 25286936 | 2R | 21291925..21292084 | 176..17 | 800 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 21:49:49 has no hits.
BS21776.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 15:39:36 Download gff for
BS21776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30392-RA | 95..766 | 17..688 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:38:04 Download gff for
BS21776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30392-RA | 98..769 | 17..688 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:43:26 Download gff for
BS21776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30392-RA | 98..769 | 17..688 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:43:26 Download gff for
BS21776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21291286..21291581 | 393..688 | 100 | <- | Minus |
| 2R | 21291642..21291859 | 175..392 | 100 | <- | Minus |
| 2R | 21291927..21292084 | 17..174 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:38:04 Download gff for
BS21776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17178791..17179086 | 393..688 | 100 | <- | Minus |
| arm_2R | 17179147..17179364 | 175..392 | 100 | <- | Minus |
| arm_2R | 17179432..17179589 | 17..174 | 100 | | Minus |
BS21776.pep Sequence
Translation from 16 to 687
> BS21776.pep
MSKTSLATQTNGTAENGNCFDILKVSNLFETSLLDEDDVQLDAYLAAYEE
IMKFFQLMGSVFSFVSSDVRSKIDILYALRAKDAEEQEHFNTFRTMLDYE
KEAQLLTQKGYVSGSRTLLRLHRGLDFVYEFLNRIQAIPDDQKTVDVCKE
AYDDTLGKHHSFLIRKGARLAMYAMPTRGDLLKKVCSDVEAAKENLPSML
KHMRTNYDRTEDLYTLYDLHSLP*
BS21776.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:59:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30392-PB | 223 | CG30392-PB | 1..223 | 1..223 | 1145 | 100 | Plus |
| CG30392-PA | 223 | CG30392-PA | 1..223 | 1..223 | 1145 | 100 | Plus |
