BS21784.complete Sequence
2093 bp assembled on 2011-03-28
GenBank Submission: KX801447
> BS21784.complete
GAAGTTATCAGTCGACATGCTTTACCTCGAAGACTATCTGGAGATGATCG
AGCACCTGCCGCAGGAGCTGCGCGACCGCTTTACCGAGATGCGCGAACTA
GATCTCGCCGTCCAGAACAACATGGACTCGCTGGACAAGAAGGCCCACAT
GTTCTTCAAGCAGTGCAAGCGCGACGAACTGCAGCACGAGTCGATGGACA
CGGAGTTCCACAGCCTGCGCGGCGAGTACTTCAAGGTGATGGAGGACGCC
GACGAGAAGGTGGCTATTGCCACTCAGATACACGAGCTGGTGGAGCGCTA
CTTGCGCCGCCTGGATAGCGAGCTCTTCAAGTTCAAGTGCGAGCTGGAGG
CGGACAACAACGGCATCACCGAAATCCTCGAGCGCCGCTCTCTGGAGCTG
GACGGCAACTCCACTGCAGCCACCGCCCTGCTGCTGAGCATGAACCAGAA
GGAGAACCGCTACTACGGCGCCAGTTCGGCCAATACCATGGTGAACAGCT
CGACGGGACACGCAACGGGTGCCGCCACTGGCTCCTCCGGCATTGCACTG
GTCAGTGGTGCTGCCGGAACGGGCGGTGCCCTCTCCAGCATCTCCACCGC
CCAGTTGGGCTCAAGTCAGCGCCACCGCAAGCTGGAGAAGCGGCGGGAAA
CCATATGCACGGTGCCTGTTCAGGAGAAGCGCGCCAATCTGAATCACTCA
CTTCCCGTGGTCGGTTCGGGCTCCACGACTGCCGCGGCAGCCTCATCTTC
GTCCGCCACAACGGCCGCAGCAGCCGCCAGCCTGGCCAGCGCGACGACTG
CCCAAACTCATGTCTCCAACCACATTGGCAGCATCGCCGCCACTCATCTC
ACCCTGCCTGTGGCCATGGGCGTGGCCGGCGGCAGTAGCAGTCTTGCCAG
CAGCTCGCTTGCCACAGGAACGGGTTCGCTGGTCCGCCAACTGCCCACGA
ACCTTACCCACACCGTGCTAAGCACCTCGGGTGGAGCGACCGCCGCAGCG
GCAGCGGGCGGCAACTCCACGTCCGTGGTCGCTGCTGGTACGGCCCACGG
GCACGCCCATGTCAGTGGGCACTCGGCCGCCGGGGCCACAGTCACCTACA
ACCTGCAACAACTGGGCGGAGGAGCCGCCGCATCTAGTGCCATTGCGGCG
GCAGCCAGCCAGGCGATCGTGGCCACACAGCAGATGCAGCAAGGCCGCCG
CACGGCCAGCCTCAAGGCGAGTTACGAGGCCATACACGGAACAGCGGGCA
CCACCACCGACTTCTGGACCCAAGCCGGTCAGGGTGGACTGCAGCAGTCG
ACCGCTGGATCGGTGACAGTGGCTGCCGGCACAGCGTTGGCCACCGGCGC
AGCTGGCGGTAGTAGCACCGGCTCGCATCATTCGCACCACTCACAGTCGC
ACCATGGCGGCCATGGGCACGGACATGGTCATGGCCATGGGCATGGTCAT
GGGCACGGACACCACAGCAGCAGTGGTCACGGCGGCGGGCACAGCAGCCA
CCACCAGGAGAAGAAGCAAAAGAAGAAGCTAACCACAGCGCTGACGTTGC
CCACAGTGCAGCCGACGGCCGGCTCCTCGTCGGGCAACTCGATTGGCTCG
TCGTCGTCGATTAGTCTGGAATCGGTGAACAAGCTCACCACGTCGGCGGC
CCTGGCGGCGGCATCGGCCACGACAACCTACATGTCTGTGGGTGGACAGG
CGCTGCTCGCCATGACCCCCGGAGGTGGAGGCGGAGGCAACTTGGCGGAG
AGTTCCGCTGAGGGCGTGCCCGCCGGAATGATTGCCATGAACCTGCCCAC
CACCACGGTAACGCCCGGCTCCAGCCTGACCATCGGCGAGAACGGACTCG
TGGTGGAGCAGACGAACGAGGGCGAATGGTCGTACGATCCCAACGAGCCG
CGCTACTGCACCTGCAACCAGGTGTCCTACGGCGACATGGTGGCCTGCGA
CAACGACGCCTGTCCCTACGAGTGGTTCCACTACCCCTGCGTGGGCATCA
CCCAGCCGCCCAAGGGCAAGTGGTACTGCCCCAAGTGCACCGCCTCCATG
CGGCGCCGTGGCAACCGAAAGAACTGAAAGCTTTCTAGACCAT
BS21784.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:37:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ing3-RA | 2061 | CG6632-PA | 1..2061 | 17..2077 | 10305 | 100 | Plus |
| CG9293-RB | 816 | CG9293-PB | 639..791 | 1885..2037 | 210 | 75.8 | Plus |
| CG9293-RA | 858 | CG9293-PA | 681..833 | 1885..2037 | 210 | 75.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:37:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ing3-RA | 2298 | CG6632-RA | 128..2189 | 16..2077 | 10310 | 100 | Plus |
| CG9293-RB | 1002 | CG9293-RB | 738..890 | 1885..2037 | 210 | 75.8 | Plus |
| CG9293-RA | 1044 | CG9293-RA | 780..932 | 1885..2037 | 210 | 75.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:37:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18650827..18652787 | 2077..117 | 9805 | 100 | Minus |
| X | 23542271 | X | 18652864..18652964 | 116..16 | 505 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:37:26 has no hits.
BS21784.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-28 10:00:40 Download gff for
BS21784.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ing3-RA | 129..2188 | 17..2076 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:38:54 Download gff for
BS21784.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ing3-RA | 129..2188 | 17..2076 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:56:49 Download gff for
BS21784.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ing3-RA | 129..2188 | 17..2076 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:56:49 Download gff for
BS21784.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18650828..18652787 | 117..2076 | 100 | <- | Minus |
| X | 18652864..18652963 | 17..116 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:38:54 Download gff for
BS21784.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18546897..18546996 | 17..116 | 100 | | Minus |
| arm_X | 18544861..18546820 | 117..2076 | 100 | <- | Minus |
BS21784.pep Sequence
Translation from 16 to 2076
> BS21784.pep
MLYLEDYLEMIEHLPQELRDRFTEMRELDLAVQNNMDSLDKKAHMFFKQC
KRDELQHESMDTEFHSLRGEYFKVMEDADEKVAIATQIHELVERYLRRLD
SELFKFKCELEADNNGITEILERRSLELDGNSTAATALLLSMNQKENRYY
GASSANTMVNSSTGHATGAATGSSGIALVSGAAGTGGALSSISTAQLGSS
QRHRKLEKRRETICTVPVQEKRANLNHSLPVVGSGSTTAAAASSSSATTA
AAAASLASATTAQTHVSNHIGSIAATHLTLPVAMGVAGGSSSLASSSLAT
GTGSLVRQLPTNLTHTVLSTSGGATAAAAAGGNSTSVVAAGTAHGHAHVS
GHSAAGATVTYNLQQLGGGAAASSAIAAAASQAIVATQQMQQGRRTASLK
ASYEAIHGTAGTTTDFWTQAGQGGLQQSTAGSVTVAAGTALATGAAGGSS
TGSHHSHHSQSHHGGHGHGHGHGHGHGHGHGHHSSSGHGGGHSSHHQEKK
QKKKLTTALTLPTVQPTAGSSSGNSIGSSSSISLESVNKLTTSAALAAAS
ATTTYMSVGGQALLAMTPGGGGGGNLAESSAEGVPAGMIAMNLPTTTVTP
GSSLTIGENGLVVEQTNEGEWSYDPNEPRYCTCNQVSYGDMVACDNDACP
YEWFHYPCVGITQPPKGKWYCPKCTASMRRRGNRKN*
BS21784.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:09:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ing3-PA | 686 | CG6632-PA | 1..686 | 1..686 | 3530 | 100 | Plus |
| CG7379-PA | 433 | CG7379-PA | 177..410 | 430..686 | 294 | 31 | Plus |
| CG9293-PB | 271 | CG9293-PB | 214..271 | 624..681 | 256 | 63.8 | Plus |
| CG9293-PA | 285 | CG9293-PA | 228..285 | 624..681 | 256 | 63.8 | Plus |
| Alh-PF | 1165 | CG1070-PF | 136..557 | 153..557 | 215 | 23.2 | Plus |
| CG9293-PA | 285 | CG9293-PA | 5..186 | 2..176 | 199 | 30.2 | Plus |
| CG9293-PB | 271 | CG9293-PB | 5..179 | 2..169 | 198 | 30.9 | Plus |
| CG7379-PA | 433 | CG7379-PA | 17..342 | 3..358 | 157 | 22.2 | Plus |
