BS21790.complete Sequence
750 bp assembled on 2011-02-01
GenBank Submission: KX802910
> BS21790.complete
GAAGTTATCAGTCGACATGGTTCTTATTATGCGTGTTTCCCCGCCGGAAC
ATGGTCTGTTGTATACGGCAAACAATATCAAGCTGAAACTAGGCGACAAA
GTGGTGGGCGAAGGCACAGTTTACATTGCCCAAAATACGCTATCCTGGCA
GCCAACTGAATTGGCGGAGGGTATATCCATTGAGTGGAAGCAGGTTAGCC
TGCACGGTATCTCTTCGAATCCGAGAAAGTGCATCTACTTCATGCTGGAC
CACAAAGTCGAGTGGAACGGCGTCTACGGAGATCCTCCCCAGCAGGCAGT
CAATGGTCGGAATGGCGGTGGTTCGGAAGCGGAAGTGGACGAGGGAAATG
GCAGCGATGAGCACGATGAGGACGACAATTTCGAGGATGCCGTAGACGAG
CAATTTGGAGAGGTCACAGAGTGCTGGCTTATGCCGGAGGACATTCACAC
CGTAGACACTATGTACAGTGCCATGACGACTTGCCAGGCCCTACATCCTG
ATTCGGCAAACAGTGATTCGGAAGACAGCGATCCTATGCAGGATGCCGGT
GGCTTAGAGGATGAGGCTATGGAGGAGGATGATGCATTGACGCTTGGGCG
CAACGGCGTGCAGAATCTCAGTTTGGACGACGACGAAGAGCGATTCGAGG
ACGCTGATGAGTGAAAGCTTTCTAGACCATTCGTTTGGCGCGCGAAAAGG
GAGGTAAGTGGTCTATACTGGCCCGTTCTATTAATTCTATAAAATCCAAA
BS21790.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:50:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| icln-RA | 648 | CG4924-PA | 1..648 | 17..664 | 3225 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:50:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| icln-RA | 832 | CG4924-RA | 70..718 | 17..665 | 3230 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:50:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17591239..17591767 | 137..665 | 2645 | 100 | Plus |
| 2R | 25286936 | 2R | 17591033..17591151 | 17..135 | 595 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:50:03 has no hits.
BS21790.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 15:39:37 Download gff for
BS21790.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| icln-RA | 68..718 | 17..668 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:38:13 Download gff for
BS21790.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| icln-RA | 70..720 | 17..668 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:43:32 Download gff for
BS21790.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| icln-RA | 70..720 | 17..668 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:43:32 Download gff for
BS21790.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17591033..17591151 | 17..135 | 100 | -> | Plus |
| 2R | 17591238..17591769 | 136..668 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:38:13 Download gff for
BS21790.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13478538..13478656 | 17..135 | 100 | -> | Plus |
| arm_2R | 13478743..13479274 | 136..668 | 99 | | Plus |
BS21790.pep Sequence
Translation from 16 to 663
> BS21790.pep
MVLIMRVSPPEHGLLYTANNIKLKLGDKVVGEGTVYIAQNTLSWQPTELA
EGISIEWKQVSLHGISSNPRKCIYFMLDHKVEWNGVYGDPPQQAVNGRNG
GGSEAEVDEGNGSDEHDEDDNFEDAVDEQFGEVTECWLMPEDIHTVDTMY
SAMTTCQALHPDSANSDSEDSDPMQDAGGLEDEAMEEDDALTLGRNGVQN
LSLDDDEERFEDADE*
BS21790.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:59:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| icln-PA | 215 | CG4924-PA | 1..215 | 1..215 | 1152 | 100 | Plus |
