Clone BS21822 Report

Search the DGRC for BS21822

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:218
Well:22
Vector:pDNR-Dual
Associated Gene/TranscriptCG13725-RA
Protein status:BS21822.pep: gold
Sequenced Size:657

Clone Sequence Records

BS21822.complete Sequence

657 bp assembled on 2011-02-01

GenBank Submission: KX803522

> BS21822.complete
GAAGTTATCAGTCGACATGGCTAAGATTCCTTTAAGCTGGAGCAGAGTTC
TTCGGCTGATTCGGTTGCATCATCTGGCGGTGGGCAACATCGCCGTGCTC
TGCCTTATTGTGTTGAGTATCATGGACTACGGGATATTAGATCTCTTCTG
TTGGTTTGAAACGGTTGAGGAGGAGAATATTCCGCTGACCGTTTTGATGT
ACATCGGTGGATTAAAGGTGGCTATTATCCTGTTTCTCGCACTGTGGTGC
TGGACTAGAGAAGAAGCTGAAAAGAATCAGGAGGGCAATATGGACATGCC
CATCTCTTACGTTCGTAAGCGGTACTGTCGTTTTCTTGTGATGAACCTGT
TGGCGTCCGTAGACCGGCTGATCCACCACCACTCACACATTGATGACTTC
CTGCAAAGTCGCAAGGACTGCGGCGAGGCAGTGGAACAGTTTCGCTGGAG
AGCTCGAAGGCTCTTTGAGCGCACGGATCTGCAACTTTGTGTTCCACTCC
ACGAAGTCCTTTCTGTGGATGATCCGCAGGAGAAGGAACTCCTCCGCTTG
GGTTACGGCGATAAATTGGCACAGTTGCGAGAGCTGGACGTCTACAAGAT
GATCTACAGCGACTAAAAGCTTTCTAGACCATTCGTGTGGCGCGCGGACC
TTTTTTA

BS21822.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:50:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG13725-RA 600 CG13725-PA 1..600 17..616 3000 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:50:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG13725-RA 901 CG13725-RA 95..694 17..616 3000 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:50:17
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17324825..17325424 616..17 3000 100 Minus
Blast to na_te.dros performed on 2014-11-26 21:50:18 has no hits.

BS21822.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 15:39:39 Download gff for BS21822.complete
Subject Subject Range Query Range Percent Splice Strand
CG13725-RA 95..701 17..622 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:38:21 Download gff for BS21822.complete
Subject Subject Range Query Range Percent Splice Strand
CG13725-RA 95..701 17..622 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:43:42 Download gff for BS21822.complete
Subject Subject Range Query Range Percent Splice Strand
CG13725-RA 95..701 17..622 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:43:42 Download gff for BS21822.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17324818..17325424 17..622 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:38:21 Download gff for BS21822.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17317918..17318524 17..622 99   Minus

BS21822.pep Sequence

Translation from 16 to 615

> BS21822.pep
MAKIPLSWSRVLRLIRLHHLAVGNIAVLCLIVLSIMDYGILDLFCWFETV
EEENIPLTVLMYIGGLKVAIILFLALWCWTREEAEKNQEGNMDMPISYVR
KRYCRFLVMNLLASVDRLIHHHSHIDDFLQSRKDCGEAVEQFRWRARRLF
ERTDLQLCVPLHEVLSVDDPQEKELLRLGYGDKLAQLRELDVYKMIYSD*

BS21822.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:59:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG13725-PA 199 CG13725-PA 1..199 1..199 1047 100 Plus