BS21823.complete Sequence
721 bp assembled on 2011-02-01
GenBank Submission: KX804562
> BS21823.complete
GAAGTTATCAGTCGACATGTTCGACTCAAAGATTAGGGTGCCCAAGTACG
ACTCGGATGCGTTCGACAATGTCGCGTACGAGCTGCAGATGACGTACACC
CTGGAGACGGATTGTAGGATAATGAGCTTTTACGACGCGATGTGGGGCAT
GGAGGTGACTGGCGGCATTGACCAGTTCGAGCCGCTGACCATTGTGAATG
TGTCACCCACTGGCCTGGCGAAGAGAGGAGGCATGCGAGTGGGCGACGAG
ATCACCCAGATCAATGATGTGCCGGCCCTGGAGATGACCTTCAATGAGGC
CCTGCAAATGTTCCGAAAGAATTCGCGATACGTTCGTGTCTACGTTAGGG
GTGATGACGATGCTCCCGGTGAGGAGGATTGGACCTGCGATTGCTGGTTT
AAGCCCAGGAAACCCTGGCGTCGTGACTTCACGCCCATTCAATGGACATT
CCCCTGGAACGATCGCCGCAAGCCTGTCTACAAGGAGTCCAATTGCTTCA
TGGTGCCCAGCAAAATGGAGGAGAAGATTCGGGCGAGACGTGCTGCCACC
TCAGCTGTTCACAAAAAGGATGAGCTGGCTCCACACACTCGCTCCTTGAC
GCCCACTCCCAGGCCAAAGAATCAACCAGGTCCGAATCTTCTCGAGACCG
TGCTCAGGCCACGTGGACCACCGCCAAGGGATTAGAAGCTTTCTAGACCA
TTCGTGTGGCGCGCGGAAGGG
BS21823.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:50:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15617-RA | 669 | CG15617-PA | 1..669 | 17..685 | 3345 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:50:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15617-RA | 1298 | CG15617-RA | 97..765 | 17..685 | 3345 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:50:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16745756..16746090 | 685..351 | 1675 | 100 | Minus |
| 2R | 25286936 | 2R | 16746149..16746483 | 351..17 | 1675 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 21:50:32 has no hits.
BS21823.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 15:39:39 Download gff for
BS21823.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15617-RA | 85..751 | 22..688 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:38:28 Download gff for
BS21823.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15617-RA | 85..751 | 22..688 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:43:48 Download gff for
BS21823.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15617-RA | 102..768 | 22..688 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:43:48 Download gff for
BS21823.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16746149..16746478 | 22..351 | 100 | | Minus |
| 2R | 16745753..16746089 | 352..688 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:38:28 Download gff for
BS21823.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12633258..12633594 | 352..688 | 99 | <- | Minus |
| arm_2R | 12633654..12633983 | 22..351 | 100 | | Minus |
BS21823.pep Sequence
Translation from 16 to 684
> BS21823.pep
MFDSKIRVPKYDSDAFDNVAYELQMTYTLETDCRIMSFYDAMWGMEVTGG
IDQFEPLTIVNVSPTGLAKRGGMRVGDEITQINDVPALEMTFNEALQMFR
KNSRYVRVYVRGDDDAPGEEDWTCDCWFKPRKPWRRDFTPIQWTFPWNDR
RKPVYKESNCFMVPSKMEEKIRARRAATSAVHKKDELAPHTRSLTPTPRP
KNQPGPNLLETVLRPRGPPPRD*
BS21823.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:59:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15617-PA | 222 | CG15617-PA | 1..222 | 1..222 | 1218 | 100 | Plus |
| CG42319-PD | 251 | CG17041-PD | 48..129 | 40..119 | 144 | 34.1 | Plus |
