BS21855.complete Sequence
833 bp assembled on 2011-02-01
GenBank Submission: KX806400
> BS21855.complete
GAAGTTATCAGTCGACATGACCATCACCAACTGGTTTAATTGGTCCGTAA
AGGATTTAAGCAATGAGTCCCATGCGAGACCCAAGTTGATTCCGGGATTC
GACCAGTTGGATAAGAGGCTGCAGGCGGCGCTTCAGGAGCGGGACGTGCA
AAAGCATCAGCGCAAGCGTACACAGGCGGGTGGTGGCCAAAGCCAGGCAA
AGCCCAAAAAGCTCAAGACGACCAGAAAACAGACACCAAGGGTATGCAAA
TTCCAGAAGGTTTACACTGAGAAACGCAAGAAGCTAAAACGAGAGGCCAA
CATGCAAAGTAATGCGTTTCAGTTCCGGAGCAGACCTGTGCCCGATTTCG
AGCGATCTCATCGTCGTTTGGAAAGGCGCAAGCTGTACCTGAACTCTCTG
CAAACGGTGACGAAGCCCCGATGCCCTGCCACGCTGGCCACGTCAATGGT
CGCTTTAAACAAGCGCCTAAAGAAGCAAAGGCAGAGCCGAAAGACATCCG
ACTTTGTGCCCCGAATCAATCCAGGCTCTTCTATGGACTACCTCAACCGG
CAGCCCTTTACGCCGCTTGTCAAGTCCTCCTTTACCCATCCAAAACCTTT
TCATCTCCATACGTCGGAGCGTGCTCTGCGCCGCCAAGTGTATGACGAGA
GGAAAAGGATACGGATGGATCGGCGTTTGGAGCAGCAGACCATCGATTGG
TTTGCACGGGAAAGAAGCGAGTACTTTAAGCTACGCAAAATGACAAATTT
CAAGGCTACGCCGAATCCCTGGAAGCAAACAAGGGTCACCGCTAGAAAAG
ATTCTCAGGCAGCCTAGAAGCTTTCTAGACCAT
BS21855.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:51:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5781-RA | 801 | CG5781-PA | 1..801 | 17..817 | 4005 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:51:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5781-RA | 898 | CG5781-RA | 53..855 | 17..819 | 4015 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:51:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12696469..12697271 | 819..17 | 4015 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 21:51:16 has no hits.
BS21855.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 15:39:42 Download gff for
BS21855.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5781-RA | 504..1304 | 17..817 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:38:53 Download gff for
BS21855.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5781-RA | 53..853 | 17..817 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:44:09 Download gff for
BS21855.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5781-RA | 53..853 | 17..817 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:44:09 Download gff for
BS21855.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12696471..12697271 | 17..817 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:38:53 Download gff for
BS21855.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12696471..12697271 | 17..817 | 100 | | Minus |
BS21855.pep Sequence
Translation from 16 to 816
> BS21855.pep
MTITNWFNWSVKDLSNESHARPKLIPGFDQLDKRLQAALQERDVQKHQRK
RTQAGGGQSQAKPKKLKTTRKQTPRVCKFQKVYTEKRKKLKREANMQSNA
FQFRSRPVPDFERSHRRLERRKLYLNSLQTVTKPRCPATLATSMVALNKR
LKKQRQSRKTSDFVPRINPGSSMDYLNRQPFTPLVKSSFTHPKPFHLHTS
ERALRRQVYDERKRIRMDRRLEQQTIDWFARERSEYFKLRKMTNFKATPN
PWKQTRVTARKDSQAA*
BS21855.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:59:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5781-PA | 266 | CG5781-PA | 1..266 | 1..266 | 1392 | 100 | Plus |
| CG15395-PB | 275 | CG15395-PB | 84..273 | 74..255 | 175 | 26.9 | Plus |
