BS21891.complete Sequence
992 bp assembled on 2011-02-02
GenBank Submission: KX804961
> BS21891.complete
GAAGTTATCAGTCGACATGGCGAGCAAAAGAAAGCACCAAGCATCCCAGA
AAGTGAAAGAGGAATCCTTCAAGAAACACACGCTTGACTCCGATGAAGAG
GATTCTGACGACTACGAAAGGGAATACCTCAATGATAGCGACATTGAGGG
CGGCGAGGAGGGCGTGGCAAAAGTGGAAGACGATGTGAAGGTAACACCCT
TCAATATGAAGGAAGAACTGGAGGAGGGACACTTCGACAAAGATGGTCAC
TACCATTGGAACAAGGAGACGGAAGCAAAGGACAATTGGTTGGACAACAT
AGACTGGGTTAAAATTGGCACACAGAAGAACGCCTTCGACCCGGCAAAAG
ATGAAGAAAACTCTTCCGATGAGGAGAAGAACGAACCCGTGGGCAAGGCC
TTTAACTTGTCCATGAACCTCATGAAAATGGTCGAGTTTATGAAACCGGG
AGAGACTGTCAAGATGACCCTGCAGCGTCTGGGTAAGCAGCGCCCCGTCC
TAACAACCCTTCAGAGGATTAAGCAGAAAAAGGCCGGCATCGTTGACCCA
AAGACACAGGAAATCTCTCAGCTCACCGAGCTGGCCAACGAGATTCTCTC
GAAGACGGGCAATATGGATATATATCAGGATACGTACGAAAGCATCAAGG
CCAAGATCGCCGATTTGCCAGGAACGAGCAAACCTAAAGTAGCCGATGAT
ATTGATATGTATGCAGATGATTTCGAAACGAAAGAATTGGAGCGCTCTAA
GACATCGTCGAGTGATAGCTCCAAACCAACGACGACTACCTCAGAGGTGA
CCTGGGAGTTTAAATGGTCGCAGGATGAGACTGATATCCAGGGACCCTTT
TCCACGGAGAAAATGTTGAAATGGTCCCAGGAGAACTACTTTAAAAACGG
AGTCTATGTGCGAAAGTGCGGCGAAAACACAAATTTCTATACAAGCAACC
GCATAGATTTCGATTTGTACTTGTAGAAGCTTTCTAGACCAT
BS21891.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:49:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
holn1-RA | 960 | CG5198-PA | 1..960 | 17..976 | 4800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:49:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
holn1-RA | 1198 | CG5198-RA | 92..1051 | 17..976 | 4800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:49:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10436507..10437169 | 314..976 | 3315 | 100 | Plus |
2L | 23513712 | 2L | 10436247..10436441 | 119..313 | 975 | 100 | Plus |
2L | 23513712 | 2L | 10436086..10436194 | 17..125 | 530 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:49:50 has no hits.
BS21891.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:01 Download gff for
BS21891.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5198-RA | 96..1055 | 17..976 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:35:31 Download gff for
BS21891.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
holn1-RA | 92..1051 | 17..976 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:10:56 Download gff for
BS21891.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
holn1-RA | 92..1051 | 17..976 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:10:56 Download gff for
BS21891.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10436249..10436441 | 121..313 | 100 | -> | Plus |
2L | 10436086..10436189 | 17..120 | 100 | -> | Plus |
2L | 10436507..10437169 | 314..976 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:35:31 Download gff for
BS21891.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10436086..10436189 | 17..120 | 100 | -> | Plus |
arm_2L | 10436249..10436441 | 121..313 | 100 | -> | Plus |
arm_2L | 10436507..10437169 | 314..976 | 100 | | Plus |
BS21891.pep Sequence
Translation from 16 to 975
> BS21891.pep
MASKRKHQASQKVKEESFKKHTLDSDEEDSDDYEREYLNDSDIEGGEEGV
AKVEDDVKVTPFNMKEELEEGHFDKDGHYHWNKETEAKDNWLDNIDWVKI
GTQKNAFDPAKDEENSSDEEKNEPVGKAFNLSMNLMKMVEFMKPGETVKM
TLQRLGKQRPVLTTLQRIKQKKAGIVDPKTQEISQLTELANEILSKTGNM
DIYQDTYESIKAKIADLPGTSKPKVADDIDMYADDFETKELERSKTSSSD
SSKPTTTTSEVTWEFKWSQDETDIQGPFSTEKMLKWSQENYFKNGVYVRK
CGENTNFYTSNRIDFDLYL*
BS21891.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:05:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
holn1-PA | 319 | CG5198-PA | 1..319 | 1..319 | 1682 | 100 | Plus |