Clone BS21894 Report

Search the DGRC for BS21894

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:218
Well:94
Vector:pDNR-Dual
Associated Gene/TranscriptCG31528-RA
Protein status:BS21894.pep: full length peptide match
Sequenced Size:1067

Clone Sequence Records

BS21894.complete Sequence

1067 bp assembled on 2011-02-02

GenBank Submission: KX803183

> BS21894.complete
GAAGTTATCAGTCGACATGAGCACCAAAGAGTCCATAGACATCTGCGCGA
AGGGTAGCGGTCGCGTTGAAACCGTCACCCTGCGCCAGAACGAACTGATC
CGGAATCTGCGCGTCCTGGTGGCAGTGCGCTTTGAGCAGGCTATTTCTCG
GATCATCCTGGTCTTCGCGGGCCAGGTGCTGAGTGACGAGGGGACCATCG
ACAGTAGGGGAATCGTCTCCGGCGTCACTGTGCACGTGGTTTGCCGGGCG
GAAGCAGCAAACTCTCCATCGCCGACGCCGATCGCGGCTACAAAGCGTTC
CAAGCCGAGCGAGCGCCTCATGAGATCGTGGCAGTCGGCCCACATAGCCT
TTCTGCAACAAGAGCCCGATGTGCTGAGAAGCCTTCTACAGGCCGATCCG
CGAATCCGGAGTCTGCTCGATGAGAATGCGGCCATGCGCCACTACTTGAA
CAGCGACCAAAACCTACGGGAGATGCTTTCGTTGGCTTTCAGCCCGGCTA
AGCAAGAGCTGGGACGCCGCCGCGACCTCCACATATCACGCATGGAGTTT
GTGCCTGGCGGGTACAAGGTCTTGAGCCGACTGAACTACTGCATGCTACA
GGCCTACGAAGACAACGTGGCCATGGCCTTTCAGCAGGCGTCACAAGGCG
CTAAAACGTCCTCGAACCCCCAGCGCGGTCTCGAGGTGAAGGACCCGCTC
CCAAACCCATGGCTTCGCATGCCGCGCATCCGAAATCCGAGGACATGCGC
TCTGCCAAGACGTGTAAATAAAGGACGATCTTCTGTTAAGCAGAGCGACC
CTAATGCCGATTGCAGGCAGAAAAGCTCATCGAAGGTGATGACTTCTACT
GCAACACAGACCAAGTGCAAGGACCGTCGATCCGGTGGTGACGGACACTG
CCAGCACTGTTACCAGAGCCAGGTGGAGCAGTTGACTCAGATGGGCTACA
GCAACCGCAGTCGCAACAAACGCGCTCTGCTCATATCTCTGGGCAATGTT
GATTGCGCTGTAAGACTACTGGACCACTGGAATCGGTTTTTGGAGGACTG
AAAGCTTTCTAGACCAT

BS21894.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:50:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG31528-RA 1035 CG31528-PA 1..1035 17..1051 5175 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:50:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG31528-RA 1228 CG31528-RA 105..1140 17..1052 5180 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:50:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4416542..4417577 17..1052 5180 100 Plus
Blast to na_te.dros performed on 2014-11-27 00:50:44 has no hits.

BS21894.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:04 Download gff for BS21894.complete
Subject Subject Range Query Range Percent Splice Strand
CG31528-RA 112..1145 17..1050 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:35:59 Download gff for BS21894.complete
Subject Subject Range Query Range Percent Splice Strand
CG31528-RA 105..1138 17..1050 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:11:20 Download gff for BS21894.complete
Subject Subject Range Query Range Percent Splice Strand
CG31528-RA 105..1138 17..1050 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:11:20 Download gff for BS21894.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4416542..4417575 17..1050 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:35:59 Download gff for BS21894.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 242264..243297 17..1050 100   Plus

BS21894.pep Sequence

Translation from 16 to 1050

> BS21894.pep
MSTKESIDICAKGSGRVETVTLRQNELIRNLRVLVAVRFEQAISRIILVF
AGQVLSDEGTIDSRGIVSGVTVHVVCRAEAANSPSPTPIAATKRSKPSER
LMRSWQSAHIAFLQQEPDVLRSLLQADPRIRSLLDENAAMRHYLNSDQNL
REMLSLAFSPAKQELGRRRDLHISRMEFVPGGYKVLSRLNYCMLQAYEDN
VAMAFQQASQGAKTSSNPQRGLEVKDPLPNPWLRMPRIRNPRTCALPRRV
NKGRSSVKQSDPNADCRQKSSSKVMTSTATQTKCKDRRSGGDGHCQHCYQ
SQVEQLTQMGYSNRSRNKRALLISLGNVDCAVRLLDHWNRFLED*

BS21894.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:05:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG31528-PA 344 CG31528-PA 1..344 1..344 1766 100 Plus
Ubqn-PB 547 CG14224-PB 9..278 7..232 273 27.3 Plus
Ubqn-PA 547 CG14224-PA 9..278 7..232 273 27.3 Plus