BS21907.complete Sequence
923 bp assembled on 2011-01-31
GenBank Submission: KX802412
> BS21907.complete
GAAGTTATCAGTCGACATGAAGTGCAGCGGCTTTCTAATCCTCCTGGTGG
TCCAGTTTGCCTGGAATGACAGCGTTCTGGCAATAGAAACTGCTTTTGAT
ATCTGGAATAAATTTGGAGATGGTGGAGCTCTGCCCAATGATCCAGAAAG
GCTAAACGAAAAAGGTATTTCGGTTCTAAGTCCAACTAACGACCTGCAAA
ACAAGAACGAAGGAACGATAACGCAATTGAGGAATCTTCTTGACAATTAT
GTGGCAAAATTATTATCCGATTTGCCCAATACTCGGAAAAAGAAAAGGAG
ACAAGGCCTGCAGGAATCTCTGCAAGCTCTAACTGGTCTAGGTTTGAGCA
TATCTCCATTGCTAAAATTCCTAACGAACATCAAGGCAGAGGAGGAGCAA
CTTGTCTCGAAACTTAATGTCCAGGAGGAATGGAAGTTCTGGGCTGCCGC
AAAGGTGTCGAAAGTTCAGGAGTCGACTAAAGGTCTTAGAACCGCGGAGG
CTGTTTCCATCACTGAAAACTTCAACAGTCGTTACGGCCTTCGATTGCGT
AGTTGTGTTGGTCTGTTTATCTGGAATCAGATTCGGTTTAACTTGGACTT
GGAAAGTTCCCTAAATGGCCTGCAAAATCCAACGGAGCACTTGATCGATG
TCACTGAAGGCTGTTCCAGCGTTAAGCCAAAAAAGTGCCGGCGGAACGTC
AGAAGAGCTATCGATGGCATCCAGAATGCTCCACAGAATTTGCTGAATCT
GCGGACTAAGGGCAACCAGTTGGAGGACATTCAACGGCAAAGTAATCAGT
GTGTGGATAAAACTGTTAAGGAATACACTGAGGAGCGGGTCGAGGTAGAA
AGACAGCTAGATGATATAATCGAGGATTATCTTGAGAGTGAAACATTTAC
CAAATAAAAGCTTTCTAGACCAT
BS21907.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:35:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33109-RA | 891 | CG33109-PA | 1..891 | 17..907 | 4455 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:35:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33109-RA | 1025 | CG33109-RA | 6..896 | 17..907 | 4455 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:35:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14220689..14221579 | 907..17 | 4455 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:35:30 has no hits.
BS21907.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:31:51 Download gff for
BS21907.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33109-RA | 1..889 | 17..905 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:02:59 Download gff for
BS21907.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33109-RA | 6..894 | 17..905 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:05:10 Download gff for
BS21907.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33109-RA | 6..894 | 17..905 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:05:10 Download gff for
BS21907.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14220691..14221579 | 17..905 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:02:59 Download gff for
BS21907.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10046413..10047301 | 17..905 | 100 | | Minus |
BS21907.pep Sequence
Translation from 16 to 906
> BS21907.pep
MKCSGFLILLVVQFAWNDSVLAIETAFDIWNKFGDGGALPNDPERLNEKG
ISVLSPTNDLQNKNEGTITQLRNLLDNYVAKLLSDLPNTRKKKRRQGLQE
SLQALTGLGLSISPLLKFLTNIKAEEEQLVSKLNVQEEWKFWAAAKVSKV
QESTKGLRTAEAVSITENFNSRYGLRLRSCVGLFIWNQIRFNLDLESSLN
GLQNPTEHLIDVTEGCSSVKPKKCRRNVRRAIDGIQNAPQNLLNLRTKGN
QLEDIQRQSNQCVDKTVKEYTEERVEVERQLDDIIEDYLESETFTK*
BS21907.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:04:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33109-PA | 296 | CG33109-PA | 1..296 | 1..296 | 1515 | 100 | Plus |
| CG16826-PB | 341 | CG16826-PB | 113..326 | 86..295 | 239 | 28 | Plus |
| CG16826-PA | 341 | CG16826-PA | 113..326 | 86..295 | 239 | 28 | Plus |
