Clone BS21914 Report

Search the DGRC for BS21914

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:219
Well:14
Vector:pDNR-Dual
Associated Gene/TranscriptCG31178-RB
Protein status:BS21914.pep: full length peptide match
Sequenced Size:686

Clone Sequence Records

BS21914.complete Sequence

686 bp assembled on 2011-01-25

GenBank Submission: KX804406

> BS21914.complete
GAAGTTATCAGTCGACATGTCTGGATCGAGGCGACGCCGTACCGTTATGG
GATACTACGAATACATAATGCCCGGGATTTATGAGTATCCTTTGATCCAA
TGTGATGCGAGTGCAATCCGTTCCTATAGTATTGACTCCATAATGACCAG
TGCTTCATCAACTTGGTCAATTCCAGATAGCAATGCCGCCTATGTAGCTG
GACCAATGGGCGTTATCCACTATCAATCGGATATGCAAACGCACTTGGCT
CTGCCAACTAGGCAAAATCTGGAAACTGGTCTTATATATCCAACCATTGA
ATCCAACTCATGTTTCCATGAGCCAAATCTAGAATATGTTCAAATGGAGA
ATGAGCACACCGATGACGACGAGGGATACGGCTATGAAATTCCCGAGATT
GTTCTCTGCTTAAACCGTTCAAATTCAGAGTCCGGCGCAGCTGAGGAATC
TGGCGATTCGCAGCGTTCGTCAAAGAGTTATTCATCGGTGGAGATTAGCG
AGCAGTCAAGATCGGGGGAATACGTTAAATTAGAATCGGTTTTCAGGAGG
CGAAGAAAAGTATCGCAGAAGCGCAAATATACCACCGAGCAGGGTTACCT
GGTTGAGGAACCCACCAGCGAACCATCTGAGGAGGATGCCGAGGAACAGG
CACCAAAATCCAGAAAATAGAAGCTTTCTAGACCAT

BS21914.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:07:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG31178-RB 654 CG31178-PB 1..654 17..670 3270 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:07:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG31178-RB 1184 CG31178-RB 421..1075 17..671 3275 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:07:12
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 21874159..21874813 17..671 3275 100 Plus
Blast to na_te.dros performed 2014-11-26 15:07:13
Subject Length Description Subject Range Query Range Score Percent Strand
HMS-Beagle2 7220 HMS-Beagle2 Beagle2 7220bp 4100..4161 342..398 109 69.4 Plus

BS21914.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:02 Download gff for BS21914.complete
Subject Subject Range Query Range Percent Splice Strand
CG31178-RB 421..1067 17..663 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:48:19 Download gff for BS21914.complete
Subject Subject Range Query Range Percent Splice Strand
CG31178-RB 421..1067 17..663 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:06:52 Download gff for BS21914.complete
Subject Subject Range Query Range Percent Splice Strand
CG31178-RB 421..1067 17..663 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:06:52 Download gff for BS21914.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21874159..21874805 17..663 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:48:19 Download gff for BS21914.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 17699881..17700527 17..663 100   Plus

BS21914.pep Sequence

Translation from 16 to 669

> BS21914.pep
MSGSRRRRTVMGYYEYIMPGIYEYPLIQCDASAIRSYSIDSIMTSASSTW
SIPDSNAAYVAGPMGVIHYQSDMQTHLALPTRQNLETGLIYPTIESNSCF
HEPNLEYVQMENEHTDDDEGYGYEIPEIVLCLNRSNSESGAAEESGDSQR
SSKSYSSVEISEQSRSGEYVKLESVFRRRRKVSQKRKYTTEQGYLVEEPT
SEPSEEDAEEQAPKSRK*

BS21914.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:09:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG31178-PB 217 CG31178-PB 1..217 1..217 1123 100 Plus