BS21916.complete Sequence
590 bp assembled on 2011-01-25
GenBank Submission: KX800364
> BS21916.complete
GAAGTTATCAGTCGACATGTGGAGCGTGCTGAAAACAAACCCGAAACTAA
TTTCAGTTGTTCAGCGTCTGCCAAACGGTTCAAACCGAAAACGATTTGAA
TACATTTTCCAAATATTAAAGTTTGTTCAAAACCCACCAAATATGCTGAA
ACAAGTGATTTTCGTGCTCCTCATCGCCGTGTGCACAATGCACAGTGCAT
CGGCCATCAAGTGTTATCAGTGCAAATCCCTCACGGATCCCAACTGCGCC
AAGGACAAGATCGATTCTGCCTCTAACATCCGCGCCGTGGATTGCGACAG
TGTGCCCAAGCCCAACACCATGGAGCAACTGCAGCCAGTGACCAGGTGCA
ACAAGGTGGTCACCAGCGACCGCGCTGGAACGATTGTGTCCCGCGACTGC
CACTTCGAGTCCATCGGGCAGAAGGACAACGAATGCACGGTGACCCACAG
CCGGCAGGTGGAGAGCTGCTACACCTGCAAGGGTGACCTGTGCAACGCAT
CCGGAGCAGGCCGCTTTGTGGCGGTCAGTGCAACGGCTCTCCTGGCGATC
CTCGCCCTCAACTTGAGCCTGTGAAAGCTTTCTAGACCAT
BS21916.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:08:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| atilla-RC | 432 | CG6579-PC | 1..432 | 143..574 | 2160 | 100 | Plus |
| atilla-RB | 432 | CG6579-PB | 1..432 | 143..574 | 2160 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:08:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| atilla-RC | 700 | CG6579-RC | 29..586 | 17..574 | 2790 | 100 | Plus |
| atilla-RB | 834 | CG6579-RB | 163..720 | 17..574 | 2790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:08:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12175565..12175771 | 574..368 | 1035 | 100 | Minus |
| 2L | 23513712 | 2L | 12177544..12177724 | 197..17 | 905 | 100 | Minus |
| 2L | 23513712 | 2L | 12176804..12176975 | 368..197 | 860 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:08:21 has no hits.
BS21916.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:03 Download gff for
BS21916.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6579-RB | 163..719 | 17..573 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:48:35 Download gff for
BS21916.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| atilla-RB | 163..719 | 17..573 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:07:13 Download gff for
BS21916.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| atilla-RB | 163..719 | 17..573 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:07:13 Download gff for
BS21916.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12176804..12176974 | 198..368 | 100 | <- | Minus |
| 2L | 12177544..12177724 | 17..197 | 100 | | Minus |
| 2L | 12175566..12175770 | 369..573 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:48:35 Download gff for
BS21916.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12175566..12175770 | 369..573 | 100 | <- | Minus |
| arm_2L | 12176804..12176974 | 198..368 | 100 | <- | Minus |
| arm_2L | 12177544..12177724 | 17..197 | 100 | | Minus |
BS21916.pep Sequence
Translation from 16 to 573
> BS21916.pep
MWSVLKTNPKLISVVQRLPNGSNRKRFEYIFQILKFVQNPPNMLKQVIFV
LLIAVCTMHSASAIKCYQCKSLTDPNCAKDKIDSASNIRAVDCDSVPKPN
TMEQLQPVTRCNKVVTSDRAGTIVSRDCHFESIGQKDNECTVTHSRQVES
CYTCKGDLCNASGAGRFVAVSATALLAILALNLSL*
BS21916.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:09:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| atilla-PC | 143 | CG6579-PC | 1..143 | 43..185 | 743 | 100 | Plus |
| atilla-PB | 143 | CG6579-PB | 1..143 | 43..185 | 743 | 100 | Plus |
