BS21918.complete Sequence
947 bp assembled on 2011-01-25
GenBank Submission: KX804206
> BS21918.complete
GAAGTTATCAGTCGACATGTCGCTCAGAAGGGGTGGATTGATGTCCTACA
ACCAGCGGCGTATTGCCCGCTGGTACTTTGGAGGTCTGGCGAGCTCCATG
GCTGCCATGGTGACTCATCCGATTGACTTGATCAAGGTGCTTATCCAAAC
TCAGGCGGAGAAGCTATCGGTATTCCAGACCACCCGCAAGATTGTCAAGG
AACAGGGACCTCTGGCCATGTACAATGGCATCTCGGCCTCAATGCTGCGC
CAATACACGTACACATTGGCCCGTTTTGGCATTTATTCGGTGGGCTCTGG
AGCTATGGACACCAGCACCATGGCCGGCAAAACATGTCTAGCCGCGATTG
CCGGTGGAATTGGCGGGTTTGTGGGCGCTCCTGCAGATCTGATCAACGTC
CGCCTGCAGAACGATGTCAAGTTGCCACCAGAGAAGAGGCGCAACTATAA
GCACGCCATAGACGGACTGGTGCGAATCACCCGCGAAGAGGGATGGAAAA
ATCTCTTCAATGGCTCCTCGATGATCGCGCTCCGTGGAGCTTTTATGACC
GTAGGCCAGATTGCGTTCTACGAGCAAAGCAAGTCCCAAATGATAAAATT
GGGAATGCCCGATTATATGGGCACCTACATCTTAGCATCAATGATCTCCT
CCGTGGTGGCCACCACCTTGACGCAGCCCATCGATGTGGTGAAGACACGT
CGCATGAATGCAGCACCTGGCGAGTATTCTGGATTGGGGGATGTGTTTGT
AAAGACTTCGAAGGAGGGACCTCTGGCTTTCTTCAAGGGATACGTTCCCT
CTTTGAGTCGATTATTGCCGCACACGGTATTATTATTCTTGGGCCTCGAG
TATCTGAGGACTCACTTTGGATATCTACCAGAGCCAAAACAGACAGGTGC
ATTTTATCGATATGATGATGTCGATGACTAAAAGCTTTCTAGACCAT
BS21918.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:08:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dic2-RC | 915 | CG4323-PC | 1..915 | 17..931 | 4575 | 100 | Plus |
| Dic2-RA | 915 | CG4323-PA | 1..915 | 17..931 | 4575 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:08:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dic2-RC | 1120 | CG4323-RC | 117..1032 | 17..932 | 4580 | 100 | Plus |
| Dic2-RA | 1599 | CG4323-RA | 596..1511 | 17..932 | 4580 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:08:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20500080..20500571 | 932..441 | 2445 | 99.8 | Minus |
| 3R | 32079331 | 3R | 20500885..20501312 | 444..17 | 2140 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:08:38 has no hits.
BS21918.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:04 Download gff for
BS21918.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4323-RB | 440..1352 | 17..929 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:48:39 Download gff for
BS21918.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic2-RA | 507..1419 | 17..929 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:07:17 Download gff for
BS21918.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic2-RA | 596..1508 | 17..929 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:07:17 Download gff for
BS21918.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20500885..20501312 | 17..444 | 100 | | Minus |
| 3R | 20500083..20500567 | 445..929 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:48:39 Download gff for
BS21918.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16325805..16326289 | 445..929 | 100 | <- | Minus |
| arm_3R | 16326607..16327034 | 17..444 | 100 | | Minus |
BS21918.pep Sequence
Translation from 16 to 930
> BS21918.pep
MSLRRGGLMSYNQRRIARWYFGGLASSMAAMVTHPIDLIKVLIQTQAEKL
SVFQTTRKIVKEQGPLAMYNGISASMLRQYTYTLARFGIYSVGSGAMDTS
TMAGKTCLAAIAGGIGGFVGAPADLINVRLQNDVKLPPEKRRNYKHAIDG
LVRITREEGWKNLFNGSSMIALRGAFMTVGQIAFYEQSKSQMIKLGMPDY
MGTYILASMISSVVATTLTQPIDVVKTRRMNAAPGEYSGLGDVFVKTSKE
GPLAFFKGYVPSLSRLLPHTVLLFLGLEYLRTHFGYLPEPKQTGAFYRYD
DVDD*
BS21918.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:09:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dic2-PC | 304 | CG4323-PC | 1..304 | 1..304 | 1556 | 100 | Plus |
| Dic2-PA | 304 | CG4323-PA | 1..304 | 1..304 | 1556 | 100 | Plus |
| Dic1-PC | 280 | CG8790-PC | 3..279 | 12..287 | 801 | 55.2 | Plus |
| Dic1-PA | 280 | CG8790-PA | 3..279 | 12..287 | 801 | 55.2 | Plus |
| Dic1-PB | 280 | CG8790-PB | 3..279 | 12..287 | 801 | 55.2 | Plus |
