Clone BS21920 Report

Search the DGRC for BS21920

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:219
Well:20
Vector:pDNR-Dual
Associated Gene/TranscriptCG34269-RA
Protein status:BS21920.pep: gold
Sequenced Size:691

Clone Sequence Records

BS21920.complete Sequence

691 bp assembled on 2011-01-25

GenBank Submission: KX802270

> BS21920.complete
GAAGTTATCAGTCGACATGGGAGGGGGGCGAAAACTGAGCAGGCCGTGCT
GGTCCTCGCATCCTGCCCCTGAGTTAAAAATGCGGAACTACTGGAAAAAC
CTTTGGCGAGTACTGGACTCCCTTACTGACCCACCTAAAAGATCGGAGGA
CAAAGTTCTCCAGAGCGATTACACAAGTCGTTTAAGCCTGGTGACCCATT
TAAGTCTGCAAAGCGAACGACGAGCTCCCCGATTTGTGATTCCATCTACA
CGGCGCCATGTGACTTTTTCGCCCAGCACTTTGGAACACGTGGAAATCCG
AATGGCGGTACAGCAGGCGGAAACATCGGCCTTCCAGAATTTCGTGCGTG
AAATGTACGATGGCTATTACCAACTATTACTCTCACAGGAGAGAGAGCTA
ACCGGCTTTCAGCCAGAACAACAGTTGGCCAATCGAAGGCTGGGAATGAA
GGACCTCGGGAGACTCCAGAAAGTGGCCACTGACATGTGGAATCGAATGG
ACAGGGACCGAAAACAACAGTACAAGGATCTGGCCATGATGGCACTGCAT
CGCCGAAGCCTACGTCTGCCCCCCGATCCTCATCGCATACCCCCACACCT
CAAAAGATCATCCAAAAAAGTGACTAAATATAGATCAACTTGCTTATATC
CCTGAAAGCTTTCTAGACCATTCGTGGGGCGCAAAAAGGGG

BS21920.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:08:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG34269-RA 576 CG34269-PA 1..576 80..655 2775 98.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:09:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG34269-RA 660 CG34269-RA 26..659 23..656 3050 98.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:08:57
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 528362..528995 23..656 3050 98.7 Plus
Blast to na_te.dros performed on 2014-11-26 15:08:58 has no hits.

BS21920.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:04 Download gff for BS21920.complete
Subject Subject Range Query Range Percent Splice Strand
CG34269-RA 17..658 17..657 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:48:45 Download gff for BS21920.complete
Subject Subject Range Query Range Percent Splice Strand
CG34269-RA 17..658 17..657 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:07:24 Download gff for BS21920.complete
Subject Subject Range Query Range Percent Splice Strand
CG34269-RA 19..660 17..657 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:07:24 Download gff for BS21920.complete
Subject Subject Range Query Range Percent Splice Strand
3L 528355..528997 17..660 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:48:45 Download gff for BS21920.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 528355..528997 17..660 98   Plus

BS21920.pep Sequence

Translation from 16 to 654

> BS21920.pep
MGGGRKLSRPCWSSHPAPELKMRNYWKNLWRVLDSLTDPPKRSEDKVLQS
DYTSRLSLVTHLSLQSERRAPRFVIPSTRRHVTFSPSTLEHVEIRMAVQQ
AETSAFQNFVREMYDGYYQLLLSQERELTGFQPEQQLANRRLGMKDLGRL
QKVATDMWNRMDRDRKQQYKDLAMMALHRRSLRLPPDPHRIPPHLKRSSK
KVTKYRSTCLYP*

BS21920.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:09:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG34269-PA 191 CG34269-PA 1..191 22..212 1000 100 Plus