BS21920.complete Sequence
691 bp assembled on 2011-01-25
GenBank Submission: KX802270
> BS21920.complete
GAAGTTATCAGTCGACATGGGAGGGGGGCGAAAACTGAGCAGGCCGTGCT
GGTCCTCGCATCCTGCCCCTGAGTTAAAAATGCGGAACTACTGGAAAAAC
CTTTGGCGAGTACTGGACTCCCTTACTGACCCACCTAAAAGATCGGAGGA
CAAAGTTCTCCAGAGCGATTACACAAGTCGTTTAAGCCTGGTGACCCATT
TAAGTCTGCAAAGCGAACGACGAGCTCCCCGATTTGTGATTCCATCTACA
CGGCGCCATGTGACTTTTTCGCCCAGCACTTTGGAACACGTGGAAATCCG
AATGGCGGTACAGCAGGCGGAAACATCGGCCTTCCAGAATTTCGTGCGTG
AAATGTACGATGGCTATTACCAACTATTACTCTCACAGGAGAGAGAGCTA
ACCGGCTTTCAGCCAGAACAACAGTTGGCCAATCGAAGGCTGGGAATGAA
GGACCTCGGGAGACTCCAGAAAGTGGCCACTGACATGTGGAATCGAATGG
ACAGGGACCGAAAACAACAGTACAAGGATCTGGCCATGATGGCACTGCAT
CGCCGAAGCCTACGTCTGCCCCCCGATCCTCATCGCATACCCCCACACCT
CAAAAGATCATCCAAAAAAGTGACTAAATATAGATCAACTTGCTTATATC
CCTGAAAGCTTTCTAGACCATTCGTGGGGCGCAAAAAGGGG
BS21920.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:08:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34269-RA | 576 | CG34269-PA | 1..576 | 80..655 | 2775 | 98.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:09:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34269-RA | 660 | CG34269-RA | 26..659 | 23..656 | 3050 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:08:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 528362..528995 | 23..656 | 3050 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:08:58 has no hits.
BS21920.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:04 Download gff for
BS21920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34269-RA | 17..658 | 17..657 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:48:45 Download gff for
BS21920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34269-RA | 17..658 | 17..657 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:07:24 Download gff for
BS21920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34269-RA | 19..660 | 17..657 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:07:24 Download gff for
BS21920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 528355..528997 | 17..660 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:48:45 Download gff for
BS21920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 528355..528997 | 17..660 | 98 | | Plus |
BS21920.pep Sequence
Translation from 16 to 654
> BS21920.pep
MGGGRKLSRPCWSSHPAPELKMRNYWKNLWRVLDSLTDPPKRSEDKVLQS
DYTSRLSLVTHLSLQSERRAPRFVIPSTRRHVTFSPSTLEHVEIRMAVQQ
AETSAFQNFVREMYDGYYQLLLSQERELTGFQPEQQLANRRLGMKDLGRL
QKVATDMWNRMDRDRKQQYKDLAMMALHRRSLRLPPDPHRIPPHLKRSSK
KVTKYRSTCLYP*
BS21920.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:09:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34269-PA | 191 | CG34269-PA | 1..191 | 22..212 | 1000 | 100 | Plus |