Clone BS21923 Report

Search the DGRC for BS21923

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:219
Well:23
Vector:pDNR-Dual
Associated Gene/TranscriptCG14985-RB
Protein status:BS21923.pep: full length peptide match
Sequenced Size:758

Clone Sequence Records

BS21923.complete Sequence

758 bp assembled on 2011-01-25

GenBank Submission: KX805964

> BS21923.complete
GAAGTTATCAGTCGACATGAGCAGCGCTTTGAACGCCAAGGAGTTACTTA
TACGCGCCGTGGAATGCGACCAAGTTGGACGGATCTTGGAGGCGCAAACG
CTGTACACAGAGGGGATCGGGCAGTTGATGCAGTTCGTCAACGGGGAACC
GGATGAAGCCAAACGGAAGGGGTTCCTGACCAGGATCAAGGAGTACATGG
ATCGGGCTGACGCAATTAAGGCGCGGATCAATGGCAAACTAATGCTCGGC
GAGGTGGTTTCCCACGTTTCCATCGACGAGAATGATACGGGCTTCGACTA
CGATCAGCTCTTCGGGAAATACATGGACGACAAGACCGTCGAGATCATGC
TGGAGGAACCCTACATGACGCAGAACTATCAGTATCAAAATCTAATAAGA
TTCTTGGAGCTAGCTGCCACAAATTGCCCAAACCTAAAGTATTTTCGACT
GATCACCAAAGAGTACAAGGATGCAAAGAATCCAGATCAGCAGGAAACAA
ATCTTGGACAGATCAAGGGTGACTTGGAGCGGCGGAACGTGACTGTCTAC
ATAAAATACGAAGACTCTCTGCACGATCGAAAAATTTACTTAAGCAATGG
CTATATAATTAAGATTGGGCGAGGTCTGCACTTCTACAAGCCCGCCAATC
CGATGTATTCCATTGGCCTGGTCAACTACAAATTCCGAAAATGCCTCCAA
ACGGATGTGGATATATGGCGCAACTCAAGCGCTGCATCGTGAAAGCTTTC
TAGACCAT

BS21923.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:06:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG14985-RB 726 CG14985-PB 1..726 17..742 3615 99.9 Plus
CG14985-RC 573 CG14985-PC 1..572 17..588 2860 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:06:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG14985-RB 2808 CG14985-RB 126..853 17..744 3625 99.9 Plus
CG14985-RC 1859 CG14985-RC 126..701 17..592 2865 99.8 Plus
CG14985-RC 1859 CG14985-RC 798..953 589..744 765 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:06:19
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4003599..4003964 17..382 1830 100 Plus
3L 28110227 3L 4004133..4004341 380..588 1045 100 Plus
3L 28110227 3L 4004516..4004671 589..744 765 99.4 Plus
Blast to na_te.dros performed on 2014-11-26 15:06:20 has no hits.

BS21923.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:01 Download gff for BS21923.complete
Subject Subject Range Query Range Percent Splice Strand
CG14985-RB 128..852 17..741 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:48:12 Download gff for BS21923.complete
Subject Subject Range Query Range Percent Splice Strand
CG14985-RB 126..850 17..741 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:06:37 Download gff for BS21923.complete
Subject Subject Range Query Range Percent Splice Strand
CG14985-RB 126..850 17..741 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:06:37 Download gff for BS21923.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4003599..4003964 17..382 100 -> Plus
3L 4004136..4004341 383..588 100 -> Plus
3L 4004516..4004668 589..741 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:48:12 Download gff for BS21923.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4003599..4003964 17..382 100 -> Plus
arm_3L 4004136..4004341 383..588 100 -> Plus
arm_3L 4004516..4004668 589..741 99   Plus

BS21923.pep Sequence

Translation from 16 to 741

> BS21923.pep
MSSALNAKELLIRAVECDQVGRILEAQTLYTEGIGQLMQFVNGEPDEAKR
KGFLTRIKEYMDRADAIKARINGKLMLGEVVSHVSIDENDTGFDYDQLFG
KYMDDKTVEIMLEEPYMTQNYQYQNLIRFLELAATNCPNLKYFRLITKEY
KDAKNPDQQETNLGQIKGDLERRNVTVYIKYEDSLHDRKIYLSNGYIIKI
GRGLHFYKPANPMYSIGLVNYKFRKCLQTDVDIWRNSSAAS*

BS21923.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:09:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG14985-PB 241 CG14985-PB 1..241 1..241 1255 100 Plus
CG14985-PC 190 CG14985-PC 1..190 1..190 980 100 Plus
CG30398-PA 267 CG30398-PA 19..241 9..235 470 41.4 Plus