Clone BS21933 Report

Search the DGRC for BS21933

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:219
Well:33
Vector:pDNR-Dual
Associated Gene/TranscriptCG33057-RA
Protein status:BS21933.pep: full length peptide match
Sequenced Size:671

Clone Sequence Records

BS21933.complete Sequence

671 bp assembled on 2011-01-25

GenBank Submission: KX803973

> BS21933.complete
GAAGTTATCAGTCGACATGGCCTCGAATCAGCAAATCAATACGCAGCTAA
GCAAAAAGCTATCCTGGCTGTTGCGGCACGGTGCGAAAACGGAGGGAATC
ACGATCCGTGCTGATGGATTTGTTAGCGTTCCCGATTTGCAGAAGCACCC
ACGCTACTTGTGCTTCACCTTAGAAAAACTGAAGGAGATTGCCGCCGCGG
ATGCCAAGCAACGATATACTCTTCGCTGGAATCCAGAACTCGGAGTCCAT
GAGATTCGCGCCAATCAGGGACACTCATTGGCGGTGCTGGAAGGCGAAGC
TGGCGGTCTCGAGAATATTACCCATGTGAGCCAGGTACCCCTGGCAGTTC
ATGGCACCTATTACAGACATTGGGGGGCAATTAGAAGCCAAGGGCTAAGT
AGGATGAACCGCAACCATGTGCACTTTGCATGCAGCGATGAGACCAATTC
CACTCTGAGTGGATTCCGCAGCGATTGCCAGATTTTGATATATCTAAACG
TGGAAAAGGTGCTGGCGGACGGCATACCCATCTATCGATCCAGCAATAAT
GTACTGCTCTGTCCGGGAATTGAAGGCTTCATACATAGTTCCTACTTTCA
GCGTGTAGTGGACAAGAAAACGGGGCAACCCTTACAAATTGATCATTGTT
ATTGAAAGCTTTCTAGACCAT

BS21933.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:36:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG33057-RB 639 CG33057-PB 1..639 17..655 3195 100 Plus
CG33057-RA 639 CG33057-PA 1..639 17..655 3195 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:36:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG33057-RB 3058 CG33057-RB 81..720 17..656 3200 100 Plus
CG33057-RA 3110 CG33057-RA 81..720 17..656 3200 100 Plus
mkg-p-RD 3058 CG7163-RD 81..720 17..656 3200 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:36:16
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8404558..8405197 656..17 3200 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:36:17 has no hits.

BS21933.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:26 Download gff for BS21933.complete
Subject Subject Range Query Range Percent Splice Strand
CG33057-RA 76..713 17..654 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:57 Download gff for BS21933.complete
Subject Subject Range Query Range Percent Splice Strand
CG33057-RA 81..718 17..654 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:18 Download gff for BS21933.complete
Subject Subject Range Query Range Percent Splice Strand
mkg-p-RD 81..718 17..654 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:18 Download gff for BS21933.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8404560..8405197 17..654 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:57 Download gff for BS21933.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8397660..8398297 17..654 100   Minus

BS21933.pep Sequence

Translation from 16 to 654

> BS21933.pep
MASNQQINTQLSKKLSWLLRHGAKTEGITIRADGFVSVPDLQKHPRYLCF
TLEKLKEIAAADAKQRYTLRWNPELGVHEIRANQGHSLAVLEGEAGGLEN
ITHVSQVPLAVHGTYYRHWGAIRSQGLSRMNRNHVHFACSDETNSTLSGF
RSDCQILIYLNVEKVLADGIPIYRSSNNVLLCPGIEGFIHSSYFQRVVDK
KTGQPLQIDHCY*

BS21933.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:08:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG33057-PB 212 CG33057-PB 1..212 1..212 1123 100 Plus
CG33057-PA 212 CG33057-PA 1..212 1..212 1123 100 Plus