BS21943.complete Sequence
1169 bp assembled on 2011-01-25
GenBank Submission: KX803817
> BS21943.complete
GAAGTTATCAGTCGACATGCCGTTGCAGGCCGCCAATGTCCAGGAGCAGC
AGTCTTCTCCGGTGGCTTTATATCCGACATCGGCCTCCCCGGTGGCTGTT
CAATCGCCACAGGACGCATTTTTGGCTGTTCAGTCGCCAGGGGCTCCTGC
CCCCGTTCAACTGGCCAACTCGTCCGACCAGCAGAATAATCCGGATGCGG
ACGCCATTGCCTCCAAACTGCCCATGCCAGTTATCATCAAGGAGGAGCCG
ATCTCTGTCAACGATGAACCGTCCGTCGACAATATAGAGGACAATACCAG
TGCCAGTACCAGTGCCAGCGGCATCGGGGGCAAGATCCCATTTAAAAAAA
TCTTCCAAAAGCGCAAGAAGTCGTCTGAACGCACTCGGGACAAGAAGTTG
CGACAGAACCGCCAGCTGCGCAAGTCCATGCTCCCCAAGAACGCTCTGAT
GGCCCTCAACGAGGTGAAGGGCGTGACCATCAGCGATTTCACCATCGACA
GCAATACCGACGGGGGATTCACGGCCGTTGTCACTGTCAACTCGAATCAG
TACGAGGGCAAGGGTACCTCGAAAATGACAGCCAAGAACGCGGCCTGCGA
GAAGGCTTGGCGCGATTTTATTATTGCAAAAATGACCCCCAAGCCGCCCC
GTATTCACCAGGTGGAGATGGGTTCGGAGCCAATGGATATCAACGAGGAT
GAGGCCGATGCACCGGATGATGATCTGCCCATGTTGAATCTGGCCTCGTT
TGCCATCTACAAGCTGTTCGCGGAGTGGGAACGGGAGGGCTATGTCGTGC
CCGAGATGCACCCTTCGGCCAATGCTGCCCAACAGGCGGGAGGGGATGCC
GGAACTCCAGTTCCCCCCGTGCCGAAGGAGCCAAAGAAGCCGCCAGTGCG
CACCGAGCTACCCTCTGGCTGGGAGACCATGCACCCGGCGACCATTCTTT
GCATTATGCGTCCGGGACTCAACTACGTGGACTACGGGTCATCTGGCGAC
AAGACCAACGGCATGCAGCATCTGGGAATCATGGTGGACAACCAGGAGTT
CCACGCCAACGGCAGATCAAAGAAAATCGCCCGTCGCAACGTGGCCGTGA
AAGTGTGCAACTCTCTGTTCGGCACCAACTTCACCTACAGCGACACCACT
TAAAAGCTTTCTAGACCAT
BS21943.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:36:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| DIP1-RI | 1137 | CG17686-PI | 1..1137 | 17..1153 | 5685 | 100 | Plus |
| DIP1-RG | 1137 | CG17686-PG | 1..1137 | 17..1153 | 5685 | 100 | Plus |
| DIP1-RE | 1137 | CG17686-PE | 1..1137 | 17..1153 | 5685 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:36:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| DIP1-RI | 3477 | CG17686-RI | 1082..2218 | 17..1153 | 5685 | 100 | Plus |
| DIP1-RG | 3195 | CG17686-RG | 1154..2290 | 17..1153 | 5685 | 100 | Plus |
| DIP1-RE | 3823 | CG17686-RE | 1428..2564 | 17..1153 | 5685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:36:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21626313..21626891 | 955..377 | 2895 | 100 | Minus |
| X | 23542271 | X | 21628361..21628721 | 377..17 | 1805 | 100 | Minus |
| X | 23542271 | X | 21626055..21626252 | 1153..956 | 990 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:36:41 has no hits.
BS21943.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:29 Download gff for
BS21943.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DIP1-RE | 1438..2572 | 17..1151 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:01:07 Download gff for
BS21943.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DIP1-RE | 1438..2572 | 17..1151 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:26 Download gff for
BS21943.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DIP1-RE | 1428..2562 | 17..1151 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:26 Download gff for
BS21943.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21626057..21626252 | 956..1151 | 100 | <- | Minus |
| X | 21626313..21626890 | 378..955 | 100 | <- | Minus |
| X | 21628361..21628721 | 17..377 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:01:07 Download gff for
BS21943.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21497084..21497279 | 956..1151 | 100 | <- | Minus |
| arm_X | 21497340..21497917 | 378..955 | 100 | <- | Minus |
| arm_X | 21499388..21499748 | 17..377 | 100 | | Minus |
BS21943.pep Sequence
Translation from 16 to 1152
> BS21943.pep
MPLQAANVQEQQSSPVALYPTSASPVAVQSPQDAFLAVQSPGAPAPVQLA
NSSDQQNNPDADAIASKLPMPVIIKEEPISVNDEPSVDNIEDNTSASTSA
SGIGGKIPFKKIFQKRKKSSERTRDKKLRQNRQLRKSMLPKNALMALNEV
KGVTISDFTIDSNTDGGFTAVVTVNSNQYEGKGTSKMTAKNAACEKAWRD
FIIAKMTPKPPRIHQVEMGSEPMDINEDEADAPDDDLPMLNLASFAIYKL
FAEWEREGYVVPEMHPSANAAQQAGGDAGTPVPPVPKEPKKPPVRTELPS
GWETMHPATILCIMRPGLNYVDYGSSGDKTNGMQHLGIMVDNQEFHANGR
SKKIARRNVAVKVCNSLFGTNFTYSDTT*
BS21943.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:08:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| DIP1-PI | 378 | CG17686-PI | 1..378 | 1..378 | 1964 | 100 | Plus |
| DIP1-PG | 378 | CG17686-PG | 1..378 | 1..378 | 1964 | 100 | Plus |
| DIP1-PE | 378 | CG17686-PE | 1..378 | 1..378 | 1964 | 100 | Plus |
| DIP1-PB | 409 | CG17686-PB | 32..409 | 1..378 | 1964 | 100 | Plus |
| DIP1-PD | 410 | CG17686-PD | 33..410 | 1..378 | 1964 | 100 | Plus |
