BS21944.complete Sequence
179 bp assembled on 2011-01-25
GenBank Submission: KX805795
> BS21944.complete
GAAGTTATCAGTCGACATGAAGACACCGGACACCAAAGCCAAGTTGCTGA
ATAATATAAGTCTATCTAAACACCTGTCTTCCAAGAAAGGCGGCTCTCGC
ACTAGTAACTGCGGCAATTGTCTGGAATTCTCCGTACTCACGCGTCTCTC
CAGCGTGCCCTGAAAGCTTTCTAGACCAT
BS21944.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:36:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42305-RC | 147 | CG42305-PC | 1..147 | 17..163 | 735 | 100 | Plus |
CG42305-RB | 147 | CG42305-PB | 1..147 | 17..163 | 735 | 100 | Plus |
CG42305-RA | 147 | CG42305-PA | 1..147 | 17..163 | 735 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:36:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42305-RC | 1018 | CG42305-RC | 453..600 | 17..164 | 740 | 100 | Plus |
CG42305-RB | 779 | CG42305-RB | 92..239 | 17..164 | 740 | 100 | Plus |
CG42305-RA | 657 | CG42305-RA | 92..239 | 17..164 | 740 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:36:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18813296..18813401 | 59..164 | 530 | 100 | Plus |
2L | 23513712 | 2L | 18813100..18813143 | 17..60 | 220 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:36:46 has no hits.
BS21944.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:29 Download gff for
BS21944.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17325-RA | 91..236 | 17..162 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:01:09 Download gff for
BS21944.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42305-RB | 92..237 | 17..162 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:29 Download gff for
BS21944.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42305-RA | 92..237 | 17..162 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:29 Download gff for
BS21944.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18813100..18813143 | 17..60 | 100 | -> | Plus |
2L | 18813298..18813399 | 61..162 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:01:09 Download gff for
BS21944.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18813100..18813143 | 17..60 | 100 | -> | Plus |
arm_2L | 18813298..18813399 | 61..162 | 100 | | Plus |
BS21944.pep Sequence
Translation from 16 to 162
> BS21944.pep
MKTPDTKAKLLNNISLSKHLSSKKGGSRTSNCGNCLEFSVLTRLSSVP*
BS21944.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:08:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42305-PC | 48 | CG42305-PC | 1..48 | 1..48 | 244 | 100 | Plus |
CG42305-PB | 48 | CG42305-PB | 1..48 | 1..48 | 244 | 100 | Plus |
CG42305-PA | 48 | CG42305-PA | 1..48 | 1..48 | 244 | 100 | Plus |