BS21959.complete Sequence
455 bp assembled on 2011-01-25
GenBank Submission: KX805606
> BS21959.complete
GAAGTTATCAGTCGACATGTCGAAGAGAGGACGTGGAGGTACCGCGGGAG
GCAAGTTCCGCATCTCCCTCGGTTTGCCCGTGGGCGCCGTGATGAACTGT
GCCGACAACACCGGAGCCAAGAACCTGTACGTGATCGCCGTCCACGGAAT
CCGCGGTCGCCTTAACCGTCTGCCCGCCGCTGGTGTCGGCGACATGTTCG
TGGCCACCGTGAAGAAGGGAAAGCCCGAGCTCAGGAAGAAGGTCATGCCT
GCCGTGGTTATTCGGCAGCGCAAACCGTTCAGGAGGAGGGACGGGGTGTT
TATATACTTTGAGGACAATGCCGGGGTAATAGTAAACAACAAGGGCGAAA
TGAAGGGCTCGGCCATCACTGGACCGGTGGCCAAGGAATGCGCCGATCTG
TGGCCCCGTATTGCATCCAATGCAAGCTCTATAGCCTAAAAGCTTTCTAG
ACCAT
BS21959.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:36:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpL23-RA | 423 | CG3661-PA | 1..423 | 17..439 | 2115 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:36:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpL23-RA | 542 | CG3661-RA | 68..490 | 17..439 | 2115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:36:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22854645..22854860 | 28..243 | 1080 | 100 | Plus |
| 2R | 25286936 | 2R | 22855443..22855642 | 240..439 | 1000 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:36:51 has no hits.
BS21959.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:30 Download gff for
BS21959.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL23-RA | 76..496 | 17..437 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:01:10 Download gff for
BS21959.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL23-RA | 68..488 | 17..437 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:31 Download gff for
BS21959.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL23-RA | 68..488 | 17..437 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:31 Download gff for
BS21959.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22854645..22854858 | 28..241 | 100 | -> | Plus |
| 2R | 22855445..22855640 | 242..437 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:01:10 Download gff for
BS21959.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18742168..18742381 | 28..241 | 100 | -> | Plus |
| arm_2R | 18742968..18743163 | 242..437 | 100 | | Plus |
BS21959.pep Sequence
Translation from 16 to 438
> BS21959.pep
MSKRGRGGTAGGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHGIRGRLN
RLPAAGVGDMFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFED
NAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA*
BS21959.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:08:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpL23-PA | 140 | CG3661-PA | 1..140 | 1..140 | 719 | 100 | Plus |
