BS21987.complete Sequence
1568 bp assembled on 2011-02-17
GenBank Submission: KX800918
> BS21987.complete
GAAGTTATCAGTCGACATGTTTTTGGAAGTCCTGTTCGCTGCTCCACTTG
TGATTTTCATTTTTCGCAAGTTATGGGCTCATTTGAATAGGACCTATTTC
ATCCTGAGTCTTTGCAAACGAATTCGAACAGAAGACGGTAGTTTGTTGGA
AAGTAAAATTTACGTAGCGCCGAGCAAAACCCGATTTGGAAACAACTTTG
ACCTCGTAAACTTTACATCTGAAAGCATATTTAACTTCATGAGAGATGCA
TCTGCAAAAGCGAAAGGTCGAAACTATCTATGGTATTTTTTCCATGCACC
CATGTATAATATTGTTCGGGCCGAGGAAGCCGAGGAGATATTGCAAAGTT
CCAAGCTTATTACCAAAAATATGATCTACGAGCTTTTGAAACCGTTTTTG
GGCGAAGGACTGCTGATTAGCACAGATCAGAAATGGCACTCTAGAAGAAA
AGCCCTGACTCCTGCTTTTCACTTTAAGGTGCTGCAATCTTTTCTGATCA
TATTCAAAGAAGAGTGCAATAAACTTGTGAAAGTCCTGCATCAAAGTGTG
AATATGGAGTTGGAGCTCAATCAGGTTATTCCTCAGTTTACGCTAAACAA
TGTTTGCGAAACCGCACTGGGAGTAAAACTTGATGACTTGTCGGAGGGTA
TTCGATATCGCCAGTCGATTCACGCCATTGAAGAAGTTATGCAGCAGCGC
TTATGCAATCCGTTCTTCTATAACATTGTGTATTTCTTTCTATTCGGCGA
CTATCGAAAGCAGGTGAATAATTTGAAGATAGCCCACGAGTTTTCCAGTA
ACATCATAGAGAAAAGGAGGAGCCTCTTCAAAAGCAACCAGCTTGGTCAA
GAGGATGAATTTGGCAAGAAGCAGCGATACGCCATGCTTGATACCCTGTT
AGCAGCCGAAGCAGATGGTCAGATCGATCATCAGGGTATCTGCGATGAGG
TCAATACCTTTATGTTCGAGGGATACGATACTACGTCCACCTGTCTAATA
TTTACCCTATTGATGCTGGCACTCCACGAGGATGTCCAGAAGAAGTGCTA
TGAGGAGATCAAATACCTTCCCGATGATAGCGACGATATCAGTGTGTTTC
AGTTTAATGAACTGGTCTATATGGAATGTGTGATCAAGGAATCTCTTCGC
TTGTTTCCCTCGGTGCCTTTCATTGGACGTCGGTGCGTGGAGGAGGGTGT
GGTCAACGGTTTAATCATGCCCAAGAACACCCAAATCAACATTCACCTTT
ACGAAATCATGAGGGATGCCCGACACTTTTCAAACCCAAAAATGTTTCAA
CCGGATCGATTCTTTCCGGAGAACACAGTGAATCGTCATCCCTTCGCTTT
TGTGCCATTTAGTGCGGGACAAAGGAATTGCATTGGTCAAAAGTTTGCTA
TCCTAGAGATTAAAGTTCTTCTGGCTGCGGTCATCAGGAATTTTAAAATA
TTACCTGTTACTCTTCTCGATGATCTTACTTTTGAAAATGGAATTGTGCT
GCGAACGAAGCAAAATATTAAAGTTAAACTGGTGCATAGGGAAAATAAAT
AAAAGCTTTCTAGACCAT
BS21987.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:55:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4ac2-RB | 1536 | CG17970-PB | 1..1536 | 17..1552 | 7680 | 100 | Plus |
Cyp4ac1-RA | 1530 | CG14032-PA | 150..1484 | 169..1503 | 1935 | 76.3 | Plus |
Cyp4ac3-RA | 1530 | CG14031-PA | 823..1509 | 842..1528 | 945 | 75.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:55:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4ac2-RB | 1709 | CG17970-RB | 41..1576 | 17..1552 | 7680 | 100 | Plus |
Cyp4ac1-RA | 1666 | CG14032-RA | 183..1517 | 169..1503 | 1935 | 76.3 | Plus |
Cyp4ac3-RA | 1606 | CG14031-RA | 871..1557 | 842..1528 | 945 | 75.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:55:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5267378..5268322 | 608..1552 | 4725 | 100 | Plus |
2L | 23513712 | 2L | 5265101..5265750 | 854..1503 | 1600 | 83.1 | Plus |
2L | 23513712 | 2L | 5266432..5266636 | 17..221 | 1025 | 100 | Plus |
2L | 23513712 | 2L | 5266694..5266898 | 221..425 | 1025 | 100 | Plus |
2L | 23513712 | 2L | 5269594..5270280 | 842..1528 | 945 | 75.8 | Plus |
2L | 23513712 | 2L | 5267095..5267195 | 508..608 | 505 | 100 | Plus |
2L | 23513712 | 2L | 5266956..5267039 | 424..507 | 420 | 100 | Plus |
2L | 23513712 | 2L | 5264349..5264497 | 275..423 | 250 | 77.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:55:42 has no hits.
BS21987.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-17 10:42:11 Download gff for
BS21987.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ac2-RB | 49..1565 | 25..1541 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:27:32 Download gff for
BS21987.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ac2-RB | 49..1565 | 25..1541 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:07:28 Download gff for
BS21987.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ac2-RB | 49..1565 | 25..1541 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:07:28 Download gff for
BS21987.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5266440..5266636 | 25..221 | 100 | -> | Plus |
2L | 5266695..5266898 | 222..425 | 100 | -> | Plus |
2L | 5266958..5267039 | 426..507 | 100 | -> | Plus |
2L | 5267095..5267195 | 508..608 | 100 | -> | Plus |
2L | 5267379..5268311 | 609..1541 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:27:32 Download gff for
BS21987.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5266440..5266636 | 25..221 | 100 | -> | Plus |
arm_2L | 5266695..5266898 | 222..425 | 100 | -> | Plus |
arm_2L | 5266958..5267039 | 426..507 | 100 | -> | Plus |
arm_2L | 5267095..5267195 | 508..608 | 100 | -> | Plus |
arm_2L | 5267379..5268311 | 609..1541 | 100 | | Plus |
BS21987.pep Sequence
Translation from 16 to 1551
> BS21987.pep
MFLEVLFAAPLVIFIFRKLWAHLNRTYFILSLCKRIRTEDGSLLESKIYV
APSKTRFGNNFDLVNFTSESIFNFMRDASAKAKGRNYLWYFFHAPMYNIV
RAEEAEEILQSSKLITKNMIYELLKPFLGEGLLISTDQKWHSRRKALTPA
FHFKVLQSFLIIFKEECNKLVKVLHQSVNMELELNQVIPQFTLNNVCETA
LGVKLDDLSEGIRYRQSIHAIEEVMQQRLCNPFFYNIVYFFLFGDYRKQV
NNLKIAHEFSSNIIEKRRSLFKSNQLGQEDEFGKKQRYAMLDTLLAAEAD
GQIDHQGICDEVNTFMFEGYDTTSTCLIFTLLMLALHEDVQKKCYEEIKY
LPDDSDDISVFQFNELVYMECVIKESLRLFPSVPFIGRRCVEEGVVNGLI
MPKNTQINIHLYEIMRDARHFSNPKMFQPDRFFPENTVNRHPFAFVPFSA
GQRNCIGQKFAILEIKVLLAAVIRNFKILPVTLLDDLTFENGIVLRTKQN
IKVKLVHRENK*
BS21987.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:21:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4ac2-PB | 511 | CG17970-PB | 1..511 | 1..511 | 2654 | 100 | Plus |
Cyp4ac1-PA | 509 | CG14032-PA | 5..507 | 6..508 | 2068 | 75.1 | Plus |
Cyp4ac3-PA | 509 | CG14031-PA | 5..507 | 6..508 | 1895 | 69.8 | Plus |
Cyp4p1-PA | 513 | CG10842-PA | 16..512 | 20..508 | 1138 | 47.1 | Plus |
Cyp4p3-PA | 515 | CG10843-PA | 10..515 | 14..509 | 1085 | 45.1 | Plus |