Clone BS21992 Report

Search the DGRC for BS21992

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:219
Well:92
Vector:pDNR-Dual
Associated Gene/TranscriptCG12680-RB
Protein status:BS21992.pep: full length peptide match
Sequenced Size:680

Clone Sequence Records

BS21992.complete Sequence

680 bp assembled on 2011-01-25

GenBank Submission: KX805376

> BS21992.complete
GAAGTTATCAGTCGACATGGAGCTGGCAGGGATTAGGTACGGGTTCAGCT
TGTGGCTCCTCTTGCTCCATTTCAGCTGTATCCTGGCCATCATCGATCAC
ACAAAATGCAAAGAATGCGAACAGTACAAATACAAATTGCCAGAGAGATG
CAAATATTTGGTGGAGGATATTCATGTGTTTGAGCGAAAATGTGGCGGCA
CATATCCACTAATGGCATTTACCAAATATCGGGATACATTCGTTAAGACC
GGCGAACCATATTCCCTGTACATGCCAAGCTCCTTGGATCATGTGCTTCT
GCTGATGAAGGACTCCGCATTGCAGAGCTGTGCGCGCATTCAAGTGGGCG
ATACGAACACGTTCTTTTGCCTGGACGATAGCACCAATGAGACGATCAAA
CTGGATGTGGCCCACATGTATTGCTTCCCATTTCACATCCAGCTGCCGGA
TGATCTGATGCAGGAGTGCCTCATAGAGAATGAGATGACCAATGGCTTTC
TGAACGATATCCTTCGCACACGACGCGGCATCATCCACTATACCTTTGGC
TCTAGTCGGGGCCATCGTCTCAATTGTGGATATTTGTTGCCGAATCTCCT
GCTCCTCGTGCCTCATCTCCTGCCATCGATGATGAGTCGTAAATTTTTAT
GCGAACTGCCATAAAAGCTTTCTAGACCAT

BS21992.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:14:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG12680-RC 648 CG12680-PC 1..648 17..664 3225 99.8 Plus
CG12680-RB 648 CG12680-PB 1..648 17..664 3225 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:14:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG12680-RC 948 CG12680-RC 99..747 17..665 3230 99.8 Plus
CG12680-RB 797 CG12680-RB 99..747 17..665 3230 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:14:21
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 4997539..4998187 17..665 3230 99.8 Plus
Blast to na_te.dros performed on 2014-11-26 15:14:22 has no hits.

BS21992.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:15 Download gff for BS21992.complete
Subject Subject Range Query Range Percent Splice Strand
CG12680-RB 1..646 17..662 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:50:09 Download gff for BS21992.complete
Subject Subject Range Query Range Percent Splice Strand
CG12680-RB 99..744 17..662 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:09:17 Download gff for BS21992.complete
Subject Subject Range Query Range Percent Splice Strand
CG12680-RB 99..744 17..662 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:09:17 Download gff for BS21992.complete
Subject Subject Range Query Range Percent Splice Strand
X 4997539..4998184 17..662 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:50:09 Download gff for BS21992.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 4891572..4892217 17..662 99   Plus

BS21992.pep Sequence

Translation from 16 to 663

> BS21992.pep
MELAGIRYGFSLWLLLLHFSCILAIIDHTKCKECEQYKYKLPERCKYLVE
DIHVFERKCGGTYPLMAFTKYRDTFVKTGEPYSLYMPSSLDHVLLLMKDS
ALQSCARIQVGDTNTFFCLDDSTNETIKLDVAHMYCFPFHIQLPDDLMQE
CLIENEMTNGFLNDILRTRRGIIHYTFGSSRGHRLNCGYLLPNLLLLVPH
LLPSMMSRKFLCELP*

BS21992.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:10:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG12680-PC 215 CG12680-PC 1..215 1..215 1165 100 Plus
CG12680-PB 215 CG12680-PB 1..215 1..215 1165 100 Plus