BS21993.complete Sequence
467 bp assembled on 2011-01-25
GenBank Submission: KX803138
> BS21993.complete
GAAGTTATCAGTCGACATGTGGAAGCTGGACACCAAAGGAGGAATCATCT
GCTCGGGCTGCCTGTCCATAGCCTTTGCCATAACCTATCTGGTTTTGATG
GACGATTACTTCTGGAAATATGGACTCTACGAGATGGGAATACACATTTC
GGCGCTGCAGATCTTGGGAAGCGTGGTCCTCATCGTTGGAGCCATAAAGC
AAAAGCACAAGTTCTTCGTGCCGTGGATGATAACCACAGGATTCTTTTTA
TACCTGATGGTGAACCTGTTCATTTCACTGATAGTCCAGGGCACAGCTTG
GATCTTCGGACCATTGATGGTCGTTCCGTTCACAGCCTATCTGGGCTGCG
CCCTGTACTCGGTGCAGAAGGCCTTCGACAGGATGCGCAAGGAGGAGCCA
CCGGCATATGCCAGCTTGTCCGACAAGAAGGAGTTCATCAATCACATATA
GAAGCTTTCTAGACCAT
BS21993.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:48:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12825-RA | 435 | CG12825-PA | 1..435 | 17..451 | 2175 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:48:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12825-RA | 585 | CG12825-RA | 49..486 | 15..452 | 2190 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:48:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7789570..7789712 | 193..335 | 700 | 99.3 | Plus |
2R | 25286936 | 2R | 7789770..7789889 | 333..452 | 600 | 100 | Plus |
2R | 25286936 | 2R | 7789254..7789358 | 15..119 | 525 | 100 | Plus |
2R | 25286936 | 2R | 7789421..7789500 | 120..199 | 400 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:48:02 has no hits.
BS21993.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-09 09:37:41 Download gff for
BS21993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12825-RA | 43..477 | 17..451 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:56 Download gff for
BS21993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12825-RA | 51..485 | 17..451 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:20:34 Download gff for
BS21993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12825-RA | 51..485 | 17..451 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:20:34 Download gff for
BS21993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7789256..7789358 | 17..119 | 100 | -> | Plus |
2R | 7789421..7789500 | 120..199 | 100 | -> | Plus |
2R | 7789577..7789712 | 200..335 | 100 | -> | Plus |
2R | 7789773..7789888 | 336..451 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:56 Download gff for
BS21993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3676926..3677005 | 120..199 | 100 | -> | Plus |
arm_2R | 3677082..3677217 | 200..335 | 100 | -> | Plus |
arm_2R | 3677278..3677393 | 336..451 | 100 | | Plus |
arm_2R | 3676761..3676863 | 17..119 | 100 | -> | Plus |
BS21993.pep Sequence
Translation from 16 to 450
> BS21993.pep
MWKLDTKGGIICSGCLSIAFAITYLVLMDDYFWKYGLYEMGIHISALQIL
GSVVLIVGAIKQKHKFFVPWMITTGFFLYLMVNLFISLIVQGTAWIFGPL
MVVPFTAYLGCALYSVQKAFDRMRKEEPPAYASLSDKKEFINHI*
BS21993.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:08:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12825-PA | 144 | CG12825-PA | 1..144 | 1..144 | 761 | 100 | Plus |
CG12824-PB | 142 | CG12824-PB | 1..142 | 1..144 | 327 | 49 | Plus |
CG12824-PA | 87 | CG12824-PA | 1..62 | 1..64 | 151 | 50 | Plus |