BS21994.complete Sequence
550 bp assembled on 2011-01-25
GenBank Submission: KX801891
> BS21994.complete
GAAGTTATCAGTCGACATGAAGCTAACACTGCGACGCTACTCCTGGGTGC
TCCTGTTCCAGTTCGCCCTTTTGGGAGTGGACCTCTTTTGCAACGCCTTT
GGTCCTTCGCTGGCCAGAAACCGATTGCAGACAGCCATAATTCTCTTTGT
CACTCAGGATGCCCTGATTATCGCGGAGTACCTGCTGTTCACCCTCGCCC
TGCACTCGACGTGTGTGTACCAGGTCGGCGCCTCGCACATAATCCTGCGG
AATTGCAAGCTCTTCATGGCCAGCATTACCATCTACTTCCTTCTGTCCGC
CTCCCAGCACTTTTGGATCATCTACCAATACCGTCAGCCGCCAGAAGAGG
ACGGTCATCATTGGCCACTGGGTCTGATTGCCCTATCAGTGGCACAGCGC
ATCATGTCGGTTTTCTATTACTACAGCTCCAAGTCGACGGCTCTGACCAT
GGCAGATCCTCGCTTCAAGGAGGAGCATCTTGACTGGATCGCAGATCAGC
TGGGCGATAAGTAAAAGCTTTCTAGACCATTCGTGTGGCGCGCAAAAGGG
BS21994.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:13:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13999-RA | 498 | CG13999-PA | 1..498 | 17..514 | 2490 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:13:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13999-RA | 1041 | CG13999-RA | 241..739 | 16..514 | 2495 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:12:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5955781..5956034 | 404..151 | 1270 | 100 | Minus |
| 2L | 23513712 | 2L | 5956092..5956226 | 150..16 | 675 | 100 | Minus |
| 2L | 23513712 | 2L | 5955614..5955723 | 514..405 | 550 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:12:58 has no hits.
BS21994.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:13 Download gff for
BS21994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13999-RA | 242..739 | 17..514 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:49:49 Download gff for
BS21994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13999-RA | 242..739 | 17..514 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:08:49 Download gff for
BS21994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13999-RA | 242..739 | 17..514 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:08:49 Download gff for
BS21994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5955614..5955723 | 405..514 | 100 | <- | Minus |
| 2L | 5955781..5956034 | 151..404 | 100 | <- | Minus |
| 2L | 5956092..5956225 | 17..150 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:49:49 Download gff for
BS21994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5955781..5956034 | 151..404 | 100 | <- | Minus |
| arm_2L | 5955614..5955723 | 405..514 | 100 | <- | Minus |
| arm_2L | 5956092..5956225 | 17..150 | 100 | | Minus |
BS21994.pep Sequence
Translation from 16 to 513
> BS21994.pep
MKLTLRRYSWVLLFQFALLGVDLFCNAFGPSLARNRLQTAIILFVTQDAL
IIAEYLLFTLALHSTCVYQVGASHIILRNCKLFMASITIYFLLSASQHFW
IIYQYRQPPEEDGHHWPLGLIALSVAQRIMSVFYYYSSKSTALTMADPRF
KEEHLDWIADQLGDK*
BS21994.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:10:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13999-PA | 165 | CG13999-PA | 1..165 | 1..165 | 862 | 100 | Plus |
