BS22013.complete Sequence
737 bp assembled on 2011-01-25
GenBank Submission: KX801648
> BS22013.complete
GAAGTTATCAGTCGACATGCAGCTTTTCACACGAGTTATCCTGTTGGCCG
TGACCATTTTCAGCGTCAGTGCCGTGCCGCGTTTTGGAGAAGATATTGGT
CTGGAGGAGGTCCTATTCCGCATGGTCCTTGGTGAGGCTGAGGGTCGAGG
TCTGACTCCTGCTGCCCAGACTTGTGCCAACATCTACCTGAACACCACCC
AGAAGAACGGCGATAAGTTGGCCAATGCCACCAATGCTTGCGAGGAGGCA
GCCAATCGCACCAATGTCGCCTACACCCAGACCAGCAACTCCACCATCAA
CCAGATCCGTCTCCAGTTGTTGACCCTGGAGCAGAACCTGCAGCTGTGCC
GCAACGAGACCGATTCGGCTATTTTCCTGAACTGCACTGTGTCCACTTTC
GACAAGAACCTCCAGCTGCTGGACACCTCCAACTCGCAGGCCTACCGTGC
TCAGTCCCAGTTCGTTTCCAATGCCACTCAGATGAATGCCGAGAAATCGA
ACTGCATCAGCTCCGCTGTTAGCGAGGCCAAGGTTCAGTCCATCCAGGCG
GCCAACGACTTTAATTCGTGTCTGGACAAGATCCCAGCCCAGCGTGAGGT
GCCACAAAAGATGGAGCAGCAGCTGAGAGAGCAGCAGCAGGAGAAGCCCA
CCCAGATAACCAAAGAGCAAGTGTCTGCGAAGCCACAGCTGATGTTCGAA
GATCTGCCTTTGACCAACTAAAAGCTTTCTAGACCAT
BS22013.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:15:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5084-RB | 705 | CG5084-PB | 1..705 | 17..721 | 3525 | 100 | Plus |
CG5084-RA | 705 | CG5084-PA | 1..705 | 17..721 | 3525 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:15:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5084-RB | 1182 | CG5084-RB | 27..733 | 15..721 | 3535 | 100 | Plus |
CG5084-RA | 773 | CG5084-RA | 27..733 | 15..721 | 3535 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:15:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18019046..18019378 | 65..397 | 1665 | 100 | Plus |
2R | 25286936 | 2R | 18019439..18019762 | 398..721 | 1620 | 100 | Plus |
2R | 25286936 | 2R | 18018691..18018746 | 15..70 | 265 | 98.2 | Plus |
Blast to na_te.dros performed 2014-11-26 15:15:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2319..2387 | 602..670 | 110 | 65.7 | Plus |
BS22013.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:17 Download gff for
BS22013.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5084-RA | 28..730 | 17..719 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:50:23 Download gff for
BS22013.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5084-RA | 29..731 | 17..719 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:09:45 Download gff for
BS22013.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5084-RA | 29..731 | 17..719 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:09:45 Download gff for
BS22013.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18019046..18019378 | 65..397 | 100 | -> | Plus |
2R | 18019439..18019760 | 398..719 | 100 | | Plus |
2R | 18018693..18018740 | 17..64 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:50:23 Download gff for
BS22013.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13906198..13906245 | 17..64 | 100 | -> | Plus |
arm_2R | 13906551..13906883 | 65..397 | 100 | -> | Plus |
arm_2R | 13906944..13907265 | 398..719 | 100 | | Plus |
BS22013.pep Sequence
Translation from 16 to 720
> BS22013.pep
MQLFTRVILLAVTIFSVSAVPRFGEDIGLEEVLFRMVLGEAEGRGLTPAA
QTCANIYLNTTQKNGDKLANATNACEEAANRTNVAYTQTSNSTINQIRLQ
LLTLEQNLQLCRNETDSAIFLNCTVSTFDKNLQLLDTSNSQAYRAQSQFV
SNATQMNAEKSNCISSAVSEAKVQSIQAANDFNSCLDKIPAQREVPQKME
QQLREQQQEKPTQITKEQVSAKPQLMFEDLPLTN*
BS22013.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:10:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5084-PB | 234 | CG5084-PB | 1..234 | 1..234 | 1169 | 100 | Plus |
CG5084-PA | 234 | CG5084-PA | 1..234 | 1..234 | 1169 | 100 | Plus |